RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 FOXD2O60548 495 aaPredicted RBP17.33■□□□□ 0.36
PKP3-209ENST00000533069 GLI1P08151 1106 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 HOXB2P14652 356 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 HNRNPLP14866 589 aaKnown RBP eCLIP17.33■□□□□ 0.36
PKP3-209ENST00000533069 UCHL3P15374 230 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 CLCN1P35523 988 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 YWHAZP63104 245 aaKnown RBP17.33■□□□□ 0.36
PKP3-209ENST00000533069 LMNB2Q03252 620 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 DRAP1Q14919 205 aaPredicted RBP17.33■□□□□ 0.36
PKP3-209ENST00000533069 EIF4HQ15056 248 aaKnown RBP17.33■□□□□ 0.36
PKP3-209ENST00000533069 KRT31Q15323 416 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 ELF2Q15723 593 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 FKBP15Q5T1M5 1219 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 EGFLAMQ63HQ2 1017 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 ANKS1BQ7Z6G8 1248 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 KBTBD6Q86V97 674 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 SLC47A2Q86VL8 602 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 CHPFQ8IZ52 775 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 PPP1R13BQ96KQ4 1090 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 DDX50Q9BQ39 737 aaKnown RBP17.33■□□□□ 0.36
PKP3-209ENST00000533069 LSM14BQ9BX40 385 aaKnown RBP17.33■□□□□ 0.36
PKP3-209ENST00000533069 NAA15Q9BXJ9 866 aaKnown RBP17.33■□□□□ 0.36
PKP3-209ENST00000533069 HSD3B7Q9H2F3 369 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 ZDHHC4Q9NPG8 344 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 ASNSD1Q9NWL6 643 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 BCCIPQ9P287 314 aaKnown RBP eCLIP17.33■□□□□ 0.36
PKP3-209ENST00000533069 HCN2Q9UL51 889 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 NAALADL1Q9UQQ1 740 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 TLR6Q9Y2C9 796 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 DAAM1Q9Y4D1 1078 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 FHOD1Q9Y613 1164 aa17.33■□□□□ 0.36
PKP3-209ENST00000533069 EP300Q09472 2414 aaPredicted RBP17.33■□□□□ 0.36
PKP3-209ENST00000533069 PTPRZ1P23471 2315 aaPredicted RBP17.32■□□□□ 0.36
PKP3-209ENST00000533069 TCRBV21S2A2A0A5A6 115 aa17.32■□□□□ 0.36
PKP3-209ENST00000533069 RHOBTB1O94844 696 aa17.32■□□□□ 0.36
PKP3-209ENST00000533069 EPN2O95208 641 aa17.32■□□□□ 0.36
PKP3-209ENST00000533069 TGM1P22735 817 aa17.32■□□□□ 0.36
PKP3-209ENST00000533069 MPP7Q5T2T1 576 aa17.32■□□□□ 0.36
PKP3-209ENST00000533069 PASD1Q8IV76 773 aa17.32■□□□□ 0.36
PKP3-209ENST00000533069 WDTC1Q8N5D0 677 aa17.32■□□□□ 0.36
PKP3-209ENST00000533069 ZNF557Q8N988 423 aaPredicted RBP17.32■□□□□ 0.36
PKP3-209ENST00000533069 IPO4Q8TEX9 1081 aaKnown RBP17.32■□□□□ 0.36
PKP3-209ENST00000533069 UCMAQ8WVF2 138 aa17.32■□□□□ 0.36
PKP3-209ENST00000533069 TMA16Q96EY4 203 aaKnown RBP17.32■□□□□ 0.36
PKP3-209ENST00000533069 PIWIL1Q96J94 861 aaKnown RBP17.32■□□□□ 0.36
PKP3-209ENST00000533069 CPXM1Q96SM3 734 aa17.32■□□□□ 0.36
PKP3-209ENST00000533069 GABRG3Q99928 467 aa17.32■□□□□ 0.36
PKP3-209ENST00000533069 STK33Q9BYT3 514 aa17.32■□□□□ 0.36
PKP3-209ENST00000533069 TPSD1Q9BZJ3 242 aa17.32■□□□□ 0.36
PKP3-209ENST00000533069 USP18Q9UMW8 372 aa17.32■□□□□ 0.36
PKP3-209ENST00000533069 PCDHGA5Q9Y5G8 931 aa17.32■□□□□ 0.36
PKP3-209ENST00000533069 PRR5-ARHGAP8B1AHC4 643 aa17.31■□□□□ 0.36
PKP3-209ENST00000533069 ZBTB24O43167 697 aaPredicted RBP17.31■□□□□ 0.36
PKP3-209ENST00000533069 ACSL4O60488 711 aa17.31■□□□□ 0.36
PKP3-209ENST00000533069 HSF2BPO75031 334 aa17.31■□□□□ 0.36
PKP3-209ENST00000533069 PNMA6AP0CW24 399 aaPredicted RBP17.31■□□□□ 0.36
PKP3-209ENST00000533069 CYP11B1P15538 503 aa17.31■□□□□ 0.36
PKP3-209ENST00000533069 HOXD9P28356 352 aaPredicted RBP17.31■□□□□ 0.36
PKP3-209ENST00000533069 ARHGAP8P85298 464 aa17.31■□□□□ 0.36
PKP3-209ENST00000533069 FANCCQ00597 558 aa17.31■□□□□ 0.36
PKP3-209ENST00000533069 SPEM2Q0P670 501 aa17.31■□□□□ 0.36
PKP3-209ENST00000533069 BYSLQ13895 437 aaKnown RBP17.31■□□□□ 0.36
PKP3-209ENST00000533069 CSRP2Q16527 193 aa17.31■□□□□ 0.36
PKP3-209ENST00000533069 PLK5Q496M5 336 aa17.31■□□□□ 0.36
PKP3-209ENST00000533069 EFHC1Q5JVL4 640 aa17.31■□□□□ 0.36
PKP3-209ENST00000533069 TAC4Q86UU9 113 aa17.31■□□□□ 0.36
PKP3-209ENST00000533069 C1orf131Q8NDD1 294 aaKnown RBP17.31■□□□□ 0.36
PKP3-209ENST00000533069 OLIG1Q8TAK6 271 aa17.31■□□□□ 0.36
PKP3-209ENST00000533069 HMGB4Q8WW32 186 aa17.31■□□□□ 0.36
PKP3-209ENST00000533069 SLC39A13Q96H72 371 aa17.31■□□□□ 0.36
PKP3-209ENST00000533069 SPACA7Q96KW9 195 aa17.31■□□□□ 0.36
PKP3-209ENST00000533069 FCRL2Q96LA5 508 aaPredicted RBP17.31■□□□□ 0.36
PKP3-209ENST00000533069 TRIM5Q9C035 493 aa17.31■□□□□ 0.36
PKP3-209ENST00000533069 VPS16Q9H269 839 aa17.31■□□□□ 0.36
PKP3-209ENST00000533069 SYNCQ9H7C4 482 aa17.31■□□□□ 0.36
PKP3-209ENST00000533069 PARD6AQ9NPB6 346 aa17.31■□□□□ 0.36
PKP3-209ENST00000533069 A0A1W2PQF6 199 aa17.3■□□□□ 0.36
PKP3-209ENST00000533069 TYW5A2RUC4 315 aaKnown RBP17.3■□□□□ 0.36
PKP3-209ENST00000533069 F8VZ95 297 aa17.3■□□□□ 0.36
PKP3-209ENST00000533069 TIMM44O43615 452 aa17.3■□□□□ 0.36
PKP3-209ENST00000533069 TSPAN3O60637 253 aa17.3■□□□□ 0.36
PKP3-209ENST00000533069 APOEP02649 317 aa17.3■□□□□ 0.36
PKP3-209ENST00000533069 SDHBP21912 280 aa17.3■□□□□ 0.36
PKP3-209ENST00000533069 ID4P47928 161 aa17.3■□□□□ 0.36
PKP3-209ENST00000533069 UBASH3AP57075 661 aa17.3■□□□□ 0.36
PKP3-209ENST00000533069 GEN1Q17RS7 908 aa17.3■□□□□ 0.36
PKP3-209ENST00000533069 SYPL2Q5VXT5 272 aa17.3■□□□□ 0.36
PKP3-209ENST00000533069 RNF43Q68DV7 783 aa17.3■□□□□ 0.36
PKP3-209ENST00000533069 ZDHHC17Q8IUH5 632 aa17.3■□□□□ 0.36
PKP3-209ENST00000533069 TMEM35BQ8NCS4 154 aa17.3■□□□□ 0.36
PKP3-209ENST00000533069 WFIKKN2Q8TEU8 576 aa17.3■□□□□ 0.36
PKP3-209ENST00000533069 MRFAP1L1Q96HT8 127 aa17.3■□□□□ 0.36
PKP3-209ENST00000533069 ACOX2Q99424 681 aa17.3■□□□□ 0.36
PKP3-209ENST00000533069 DUSP15Q9H1R2 295 aaPredicted RBP17.3■□□□□ 0.36
PKP3-209ENST00000533069 GANQ9H2C0 597 aa17.3■□□□□ 0.36
PKP3-209ENST00000533069 PDCL3Q9H2J4 239 aa17.3■□□□□ 0.36
PKP3-209ENST00000533069 SEMA4GQ9NTN9 838 aa17.3■□□□□ 0.36
PKP3-209ENST00000533069 LSM8O95777 96 aaKnown RBP17.29■□□□□ 0.36
PKP3-209ENST00000533069 TRUB2O95900 331 aaKnown RBP17.29■□□□□ 0.36
PKP3-209ENST00000533069 IGLV3-25P01717 112 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms