RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 GYS2P54840 703 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 GEMIN4P57678 1058 aaKnown RBP12.7□□□□□ -0.38
CHD7-211ENST00000532149 BASP1P80723 227 aaKnown RBP12.7□□□□□ -0.38
CHD7-211ENST00000532149 PDIA2Q13087 525 aaKnown RBP12.7□□□□□ -0.38
CHD7-211ENST00000532149 KCNJ11Q14654 390 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 BSPRYQ5W0U4 402 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 ZNF280DQ6N043 979 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 CD300LGQ6UXG3 332 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 ANKRD33Q7Z3H0 272 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 NPAS4Q8IUM7 802 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 ZBED8Q8IZ13 594 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 ZNF454Q8N9F8 522 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 OR2W6PQ8NHA6 318 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 BCAS4Q8TDM0 211 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 ZNF296Q8WUU4 475 aaPredicted RBP12.7□□□□□ -0.38
CHD7-211ENST00000532149 HTR3CQ8WXA8 447 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 ARHGEF2Q92974 986 aaKnown RBP12.7□□□□□ -0.38
CHD7-211ENST00000532149 ACSF2Q96CM8 615 aaPredicted RBP12.7□□□□□ -0.38
CHD7-211ENST00000532149 SGSM3Q96HU1 749 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 OLFM3Q96PB7 478 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 PLCD4Q9BRC7 762 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 NSRP1Q9H0G5 558 aaKnown RBP12.7□□□□□ -0.38
CHD7-211ENST00000532149 TRPV6Q9H1D0 765 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.7□□□□□ -0.38
CHD7-211ENST00000532149 XPO7Q9UIA9 1087 aaKnown RBP12.7□□□□□ -0.38
CHD7-211ENST00000532149 INPP5FQ9Y2H2 1132 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 PCDHB5Q9Y5E4 795 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 HEY1Q9Y5J3 304 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 IKBKGQ9Y6K9 419 aa12.7□□□□□ -0.38
CHD7-211ENST00000532149 A0A0A0MRY4 1105 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 DCDC2CA8MYV0 355 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 FAM155BO75949 473 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 CXCL10P02778 98 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 SHBGP04278 402 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 CCR1P32246 355 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 HPDP32754 393 aaPredicted RBP12.69□□□□□ -0.38
CHD7-211ENST00000532149 ILF2Q12905 390 aaKnown RBP12.69□□□□□ -0.38
CHD7-211ENST00000532149 SEMA3BQ13214 749 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 NAB1Q13506 487 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 SEMA5AQ13591 1074 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 DPYSQ14117 519 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 MRPL58Q14197 206 aaKnown RBP12.69□□□□□ -0.38
CHD7-211ENST00000532149 PARP6Q2NL67 630 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 KIAA0319Q5VV43 1072 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 BTBD8Q5XKL5 378 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 ITPRIPL1Q6GPH6 555 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 C1orf228Q6PIY5 440 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 RFX8Q6ZV50 586 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 ANKS3Q6ZW76 656 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 RTN4RL1Q86UN2 441 aaPredicted RBP12.69□□□□□ -0.38
CHD7-211ENST00000532149 ZC3H18Q86VM9 953 aaKnown RBP12.69□□□□□ -0.38
CHD7-211ENST00000532149 NUP93Q8N1F7 819 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 ZMIZ2Q8NF64 920 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 SLC7A14Q8TBB6 771 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 CLEC4CQ8WTT0 213 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 SPATA17Q96L03 361 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 C1orf74Q96LT6 269 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 SPATA13Q96N96 652 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 SERPINB11Q96P15 392 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 KCTD15Q96SI1 283 aaPredicted RBP12.69□□□□□ -0.38
CHD7-211ENST00000532149 RTP3Q9BQQ7 232 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 ACSS3Q9H6R3 686 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 CATSPERBQ9H7T0 1116 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 WDR6Q9NNW5 1121 aaKnown RBP12.69□□□□□ -0.38
CHD7-211ENST00000532149 ARHGEF4Q9NR80 690 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 RAB6BQ9NRW1 208 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 INTS9Q9NV88 658 aaKnown RBP12.69□□□□□ -0.38
CHD7-211ENST00000532149 ETNK2Q9NVF9 386 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 TBC1D13Q9NVG8 400 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 DDIT4Q9NX09 232 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 NKIRAS1Q9NYS0 192 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 CLIC5Q9NZA1 410 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 DTLQ9NZJ0 730 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 PSMC3IPQ9P2W1 217 aaPredicted RBP12.69□□□□□ -0.38
CHD7-211ENST00000532149 ADAM28Q9UKQ2 775 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 MAFFQ9ULX9 164 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 SCML2Q9UQR0 700 aa12.69□□□□□ -0.38
CHD7-211ENST00000532149 COL4A4P53420 1690 aaPredicted RBP12.69□□□□□ -0.38
CHD7-211ENST00000532149 TSC2P49815 1807 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 IQANK1A0A1B0GTG1 560 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 MAGEB16A2A368 324 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 YJEFN3A6XGL0 299 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 E7ENQ6 273 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 NDUFAB1O14561 156 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 BEST1O76090 585 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 IGLV3-25P01717 112 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 USP17L7P0C7H9 530 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 BDNFP23560 247 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 CNTFP26441 200 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 RBL1P28749 1068 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 GRIK1P39086 918 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 TPI1P60174 286 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 RPL10AP62906 217 aaKnown RBP12.68□□□□□ -0.38
CHD7-211ENST00000532149 PRKD1Q15139 912 aaPredicted RBP12.68□□□□□ -0.38
CHD7-211ENST00000532149 CLLU1OSQ5K130 101 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 NUGGCQ68CJ6 796 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 NCBP2-AS2Q69YL0 99 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 MSANTD2Q6P1R3 559 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 KCNT2Q6UVM3 1135 aa12.68□□□□□ -0.38
CHD7-211ENST00000532149 LRRC31Q6UY01 552 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms