RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 NKX1-2Q9UD57 310 aaPredicted RBP17.39■□□□□ 0.37
VPS26B-206ENST00000531741 HCRTO43612 131 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 DAB1O75553 588 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 PDGFRBP09619 1106 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 VAV1P15498 845 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 GOT1P17174 413 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 AMPD1P23109 780 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 GLUD2P49448 558 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 TAF6P49848 677 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 BMPR2Q13873 1038 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 NDUFAF2Q8N183 169 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 APPL2Q8NEU8 664 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 SLC2A14Q8TDB8 520 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 LRRN4Q8WUT4 740 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 DEPDC1BQ8WUY9 529 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 OSMRQ99650 979 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 NAT9Q9BTE0 207 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 FAM49AQ9H0Q0 323 aaPredicted RBP17.38■□□□□ 0.37
VPS26B-206ENST00000531741 DCLRE1BQ9H816 532 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 CDHR5Q9HBB8 845 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 ARHGEF4Q9NR80 690 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 FBXO6Q9NRD1 293 aaPredicted RBP17.38■□□□□ 0.37
VPS26B-206ENST00000531741 SDR42E2A6NKP2 422 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 SPTLC1O15269 473 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 GSC2O15499 205 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 STK10O94804 968 aaKnown RBP17.38■□□□□ 0.37
VPS26B-206ENST00000531741 F2P00734 622 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 BPGMP07738 259 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 FAM163BP0C2L3 166 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 TMPRSS15P98073 1019 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 NIPAL4Q0D2K0 466 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 CRYMQ14894 314 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 SV2CQ496J9 727 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 CMPK2Q5EBM0 449 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 FAM182AQ5T1J6 154 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 DPP9Q86TI2 863 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 NUDCD3Q8IVD9 361 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 GPATCH11Q8N954 259 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 HNRNPABQ99729 332 aaKnown RBP17.38■□□□□ 0.37
VPS26B-206ENST00000531741 TINF2Q9BSI4 451 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 GINS2Q9Y248 185 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 LRRC42Q9Y546 428 aa17.38■□□□□ 0.37
VPS26B-206ENST00000531741 FAM237BA0A1B0GVD1 139 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 FCHO1O14526 889 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 SMIM10L2AP0DMW4 78 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 SMIM10L2BP0DMW5 78 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 WARSP23381 471 aaKnown RBP17.37■□□□□ 0.37
VPS26B-206ENST00000531741 EPHX2P34913 555 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 GRIA1P42261 906 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 CLNS1AP54105 237 aaKnown RBP17.37■□□□□ 0.37
VPS26B-206ENST00000531741 TMEM62Q0P6H9 643 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 CHI3L2Q15782 390 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 MROH9Q5TGP6 573 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 DENND5BQ6ZUT9 1274 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 PAXIP1Q6ZW49 1069 aaPredicted RBP17.37■□□□□ 0.37
VPS26B-206ENST00000531741 GPR142Q7Z601 462 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 TOP6BLQ8N6T0 577 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 STKLD1Q8NE28 680 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 MS4A4AQ96JQ5 239 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 FERMT1Q9BQL6 677 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 SIKE1Q9BRV8 207 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 MECRQ9BV79 373 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 MAGEB5Q9BZ81 275 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 SLC13A1Q9BZW2 595 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 WWP1Q9H0M0 922 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 PCMTD2Q9NV79 361 aa17.37■□□□□ 0.37
VPS26B-206ENST00000531741 BTBD19C9JJ37 291 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 H3BRJ5 948 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 GYG2O15488 501 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 RARBP10826 455 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 IRF5Q13568 498 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 DEFB106AQ8N104 65 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 KCTD13Q8WZ19 329 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 CDKL2Q92772 493 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 DUSP16Q9BY84 665 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 ZNF236Q9UL36 1845 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 CAPN14A8MX76 684 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 MFSD11O43934 449 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 ESRRAP11474 423 aaPredicted RBP17.36■□□□□ 0.37
VPS26B-206ENST00000531741 AKAP5P24588 427 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 NOS2P35228 1153 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 SULT1E1P49888 294 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 PDK1Q15118 436 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 HSF5Q4G112 596 aaPredicted RBP17.36■□□□□ 0.37
VPS26B-206ENST00000531741 OTUD1Q5VV17 481 aaPredicted RBP17.36■□□□□ 0.37
VPS26B-206ENST00000531741 CES4AQ5XG92 561 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 ANKRD23Q86SG2 305 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 PIGZQ86VD9 579 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 FAM131BQ86XD5 332 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 CRLF3Q8IUI8 442 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.36■□□□□ 0.37
VPS26B-206ENST00000531741 ADGRF2Q8IZF7 708 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 PYROXD2Q8N2H3 581 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 COLGALT1Q8NBJ5 622 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 B3GALNT2Q8NCR0 500 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 RNF139Q8WU17 664 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 PRR11Q96HE9 360 aaPredicted RBP17.36■□□□□ 0.37
VPS26B-206ENST00000531741 NPY6RQ99463 290 aa17.36■□□□□ 0.37
VPS26B-206ENST00000531741 TRIM56Q9BRZ2 755 aaKnown RBP17.36■□□□□ 0.37
VPS26B-206ENST00000531741 NMUR2Q9GZQ4 415 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms