RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 PPP1R9BQ96SB3 815 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 TBCBQ99426 244 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 SELENOOQ9BVL4 669 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 SPHK2Q9NRA0 654 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 PIGVQ9NUD9 493 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 DDIT4Q9NX09 232 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 ARHGEF38Q9NXL2 777 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 CNOT8Q9UFF9 292 aaKnown RBP15.04■□□□□ -0
CPSF1-206ENST00000531480 SCINQ9Y6U3 715 aa15.04■□□□□ -0
CPSF1-206ENST00000531480 TMEM221A6NGB7 291 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 SPECC1L-ADORA2AF8WAN1 911 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 M0R296 226 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 SCAMP3O14828 347 aaKnown RBP15.03■□□□□ -0
CPSF1-206ENST00000531480 AKR1B10O60218 316 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 ACSL4O60488 711 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 PENKP01210 267 aaPredicted RBP15.03■□□□□ -0
CPSF1-206ENST00000531480 PDGFRAP16234 1089 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 SDC4P31431 198 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 CCR1P32246 355 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 GJA4P35212 333 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 EIF2DP41214 584 aaKnown RBP15.03■□□□□ -0
CPSF1-206ENST00000531480 GALCP54803 685 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 FAM133BQ5BKY9 247 aaKnown RBP15.03■□□□□ -0
CPSF1-206ENST00000531480 ZC3H12AQ5D1E8 599 aaKnown RBP15.03■□□□□ -0
CPSF1-206ENST00000531480 BRMS1LQ5PSV4 323 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 NADSYN1Q6IA69 706 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 PHLDB2Q86SQ0 1253 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 TMTC1Q8IUR5 882 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 ETFBKMTQ8IXQ9 262 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 ZNF653Q96CK0 615 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 SHDQ96IW2 340 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 BTN2A3PQ96KV6 586 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 MCEEQ96PE7 176 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 THAP2Q9H0W7 228 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 FAM204AQ9H8W3 233 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 PIAS3Q9Y6X2 628 aa15.03■□□□□ -0
CPSF1-206ENST00000531480 I6L893 689 aaPredicted RBP15.02■□□□□ -0
CPSF1-206ENST00000531480 MAN2B1O00754 1011 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 TRDMT1O14717 391 aaKnown RBP15.02■□□□□ -0
CPSF1-206ENST00000531480 ATMINO43313 823 aaPredicted RBP15.02■□□□□ -0
CPSF1-206ENST00000531480 ADH1CP00326 375 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 GPD1P21695 349 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 RDXP35241 583 aaKnown RBP15.02■□□□□ -0
CPSF1-206ENST00000531480 SLC11A2P49281 568 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 SULT1E1P49888 294 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 OGDHQ02218 1023 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 ZNF252P-AS1Q0IIN9 211 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 NR1H3Q13133 447 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 TCEAL1Q15170 157 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 LY6G5CQ5SRR4 150 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 C10orf76Q5T2E6 689 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 ARTNQ5T4W7 220 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 TXNDC11Q6PKC3 985 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 TMEM25Q86YD3 366 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 SIX5Q8N196 739 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 PRMT1Q99873 361 aaKnown RBP15.02■□□□□ -0
CPSF1-206ENST00000531480 CNPY3Q9BT09 278 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 OSBPL6Q9BZF3 934 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 DEF6Q9H4E7 631 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 MRPL47Q9HD33 250 aaKnown RBP15.02■□□□□ -0
CPSF1-206ENST00000531480 FBXO10Q9UK96 956 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 FBXL21Q9UKT6 434 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 INTUQ9ULD6 942 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 CA14Q9ULX7 337 aa15.02■□□□□ -0
CPSF1-206ENST00000531480 DOCK4Q8N1I0 1966 aa15.02□□□□□ -0.01
CPSF1-206ENST00000531480 A0A0A0MRY4 1105 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 CACNG3O60359 315 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 APOEP02649 317 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 TMEM253P0C7T8 217 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 ADH5P11766 374 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 OPRD1P41143 372 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 SOX9P48436 509 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 HDAC4P56524 1084 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 AMPD2Q01433 879 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 GAD2Q05329 585 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 DEUP1Q05D60 604 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 C15orf59Q2T9L4 293 aaPredicted RBP15.01□□□□□ -0.01
CPSF1-206ENST00000531480 C5orf22Q49AR2 442 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 MPP7Q5T2T1 576 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 ACBD5Q5T8D3 534 aaPredicted RBP15.01□□□□□ -0.01
CPSF1-206ENST00000531480 SH3PXD2AQ5TCZ1 1133 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 FYB2Q5VWT5 728 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 TPRG1Q6ZUI0 275 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 PHTF2Q8N3S3 785 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 ATP6V0D2Q8N8Y2 350 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 SPC24Q8NBT2 197 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 TTC16Q8NEE8 873 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 ARHGEF26Q96DR7 871 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 PDLIM2Q96JY6 352 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 PACSIN1Q9BY11 444 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 ANLNQ9NQW6 1124 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 SPTLC3Q9NUV7 552 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 XPO7Q9UIA9 1087 aaKnown RBP15.01□□□□□ -0.01
CPSF1-206ENST00000531480 PAXBP1Q9Y5B6 917 aa15.01□□□□□ -0.01
CPSF1-206ENST00000531480 KANSL1LA0AUZ9 987 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 EIF3CLB5ME19 914 aaKnown RBP15□□□□□ -0.01
CPSF1-206ENST00000531480 CCP110O43303 1012 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 H2AFZP0C0S5 128 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 ABCB4P21439 1286 aa15□□□□□ -0.01
CPSF1-206ENST00000531480 SLC6A4P31645 630 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms