RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 H3BUI4 141 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 FAM189A1O60320 539 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 GPC4O75487 556 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 DDAH1O94760 285 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 CALM1P0DP23 149 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 CALM2P0DP24 149 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 CALM3P0DP25 149 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 CDH1P12830 882 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 TNFAIP3P21580 790 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 KLRC2P26717 231 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 WEE1P30291 646 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 L1CAMP32004 1257 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 HADHAP40939 763 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 STX1BP61266 288 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 RACK1P63244 317 aaKnown RBP8.01□□□□□ -1.13
PTPRK-219ENST00000531050 IKBKEQ14164 716 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 PPP2R5DQ14738 602 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 MAPRE1Q15691 268 aaKnown RBP8.01□□□□□ -1.13
PTPRK-219ENST00000531050 UGT3A1Q6NUS8 523 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 POTEAQ6S8J7 498 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 LYPD8Q6UX82 237 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 PLEKHG7Q6ZR37 379 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 SH2D5Q6ZV89 423 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 FRMD5Q7Z6J6 570 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 LURAP1LQ8IV03 231 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 HERC6Q8IVU3 1022 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 CCDC28AQ8IWP9 274 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 BRSK2Q8IWQ3 736 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 ASCC1Q8N9N2 400 aaKnown RBP8.01□□□□□ -1.13
PTPRK-219ENST00000531050 EPS8L1Q8TE68 723 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 APOPT1Q96IL0 206 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 KCNK16Q96T55 309 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 UQCC2Q9BRT2 126 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 ANKRD60Q9BZ19 345 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 COQ10BQ9H8M1 238 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.01□□□□□ -1.13
PTPRK-219ENST00000531050 SEPT11Q9NVA2 429 aaKnown RBP8.01□□□□□ -1.13
PTPRK-219ENST00000531050 TMEM9Q9P0T7 183 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 CLUHO75153 1309 aa8.01□□□□□ -1.13
PTPRK-219ENST00000531050 BAZ2BQ9UIF8 2168 aaKnown RBP8.01□□□□□ -1.13
PTPRK-219ENST00000531050 DENND3A2RUS2 1198 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 FAM155AB1AL88 458 aaPredicted RBP8□□□□□ -1.13
PTPRK-219ENST00000531050 I3L4J1 428 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 AURKAO14965 403 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 CCNT1O60563 726 aaKnown RBP8□□□□□ -1.13
PTPRK-219ENST00000531050 RNASEH2AO75792 299 aaKnown RBP8□□□□□ -1.13
PTPRK-219ENST00000531050 MTA2O94776 668 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 ARHGEF15O94989 841 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 ZBTB7AO95365 584 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 BCL10O95999 233 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 FTLP02792 175 aaPredicted RBP8□□□□□ -1.13
PTPRK-219ENST00000531050 MCF2P10911 925 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 NCAM1P13591 858 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 KRT5P13647 590 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 CCNA2P20248 432 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 NR2F2P24468 414 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 TTKP33981 857 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 RFC1P35251 1148 aaPredicted RBP8□□□□□ -1.13
PTPRK-219ENST00000531050 GPD2P43304 727 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 DSTNP60981 165 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 GBE1Q04446 702 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 GRSF1Q12849 480 aaKnown RBP eCLIP8□□□□□ -1.13
PTPRK-219ENST00000531050 DRAP1Q14919 205 aaPredicted RBP8□□□□□ -1.13
PTPRK-219ENST00000531050 SNAP47Q5SQN1 464 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 DDX59Q5T1V6 619 aaKnown RBP eCLIP8□□□□□ -1.133e-6■■■■■ 29.3
PTPRK-219ENST00000531050 FRMD7Q6ZUT3 714 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 ADAMTSL2Q86TH1 951 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 SIX6OS1Q8N1H7 587 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 ZBTB38Q8NAP3 1195 aaPredicted RBP8□□□□□ -1.13
PTPRK-219ENST00000531050 PDPRQ8NCN5 879 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 ABHD11Q8NFV4 315 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 DCAKDQ8WVC6 231 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 FAM89AQ96GI7 184 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 SERAC1Q96JX3 654 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 PAFAH2Q99487 392 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 MECRQ9BV79 373 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 OR2B2Q9GZK3 357 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 C20orf27Q9GZN8 174 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 AKIP1Q9NQ31 210 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 FETUBQ9UGM5 382 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 SERPINA10Q9UK55 444 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 PTBP2Q9UKA9 531 aaKnown RBP8□□□□□ -1.13
PTPRK-219ENST00000531050 ZNF652Q9Y2D9 606 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 AFG3L2Q9Y4W6 797 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 UGT2A1Q9Y4X1 527 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 MAU2Q9Y6X3 613 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 MYH14Q7Z406 1995 aaKnown RBP8□□□□□ -1.13
PTPRK-219ENST00000531050 ARAP2Q8WZ64 1704 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 FADS2P1A8MWK0 482 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 ZW10O43264 779 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 SNX2O60749 519 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 KCNH1O95259 989 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 PKLRP30613 574 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 PTGS2P35354 604 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 MAPK10P53779 464 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 MLLT6P55198 1093 aaPredicted RBP8□□□□□ -1.13
PTPRK-219ENST00000531050 GPC5P78333 572 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 SLC18A2Q05940 514 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 POU6F1Q14863 301 aa8□□□□□ -1.13
PTPRK-219ENST00000531050 VPS72Q15906 364 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms