RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.35□□□□□ -0.43
LTBP3-219ENST00000530990 ADAM22Q9P0K1 906 aa12.35□□□□□ -0.43
LTBP3-219ENST00000530990 XPO7Q9UIA9 1087 aaKnown RBP12.35□□□□□ -0.43
LTBP3-219ENST00000530990 TMEM59LQ9UK28 342 aa12.35□□□□□ -0.43
LTBP3-219ENST00000530990 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.35□□□□□ -0.43
LTBP3-219ENST00000530990 FANCMQ8IYD8 2048 aa12.35□□□□□ -0.43
LTBP3-219ENST00000530990 GOLGA6L7A0A1B0GV03 622 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 ANTXRLA6NF34 631 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 TMCO5BA8MYB1 307 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.34□□□□□ -0.43
LTBP3-219ENST00000530990 M0QYT0 321 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 GFRA2O00451 464 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 DDX3XO00571 662 aaKnown RBP eCLIP12.34□□□□□ -0.43
LTBP3-219ENST00000530990 ACSL4O60488 711 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 TSPAN3O60637 253 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 RNF40O75150 1001 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 KAT7O95251 611 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 APOEP02649 317 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 CALB1P05937 261 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 SLC6A4P31645 630 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 SLC11A2P49281 568 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 SGSHP51688 502 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 NHLH1Q02575 133 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 NME3Q13232 169 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 TRIM14Q14142 442 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 ANGPT1Q15389 498 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 ADGRF1Q5T601 910 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 ACAD10Q6JQN1 1059 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 RFWD3Q6PCD5 774 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 DNAAF5Q86Y56 855 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 JOSD2Q8TAC2 188 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 SYN2Q92777 582 aaPredicted RBP12.34□□□□□ -0.43
LTBP3-219ENST00000530990 CFAP57Q96MR6 1250 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 PRICKLE1Q96MT3 831 aaPredicted RBP12.34□□□□□ -0.43
LTBP3-219ENST00000530990 PNKPQ96T60 521 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 TBCBQ99426 244 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 PRRX2Q99811 253 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 NUCKS1Q9H1E3 243 aaKnown RBP12.34□□□□□ -0.43
LTBP3-219ENST00000530990 ARHGEF4Q9NR80 690 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 PIGVQ9NUD9 493 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 DNAJC17Q9NVM6 304 aaKnown RBP12.34□□□□□ -0.43
LTBP3-219ENST00000530990 WDR35Q9P2L0 1181 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 STAP1Q9ULZ2 295 aa12.34□□□□□ -0.43
LTBP3-219ENST00000530990 LUC7L2Q9Y383 392 aaKnown RBP12.34□□□□□ -0.43
LTBP3-219ENST00000530990 MUC22E2RYF6 1773 aaPredicted RBP12.33□□□□□ -0.44
LTBP3-219ENST00000530990 TCRBV5S1A1TA0A578 114 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 K7EQS6 105 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 ATMINO43313 823 aaPredicted RBP12.33□□□□□ -0.44
LTBP3-219ENST00000530990 CYBBP04839 570 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 APODP05090 189 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 PLEKP08567 350 aaPredicted RBP12.33□□□□□ -0.44
LTBP3-219ENST00000530990 HOXD9P28356 352 aaPredicted RBP12.33□□□□□ -0.44
LTBP3-219ENST00000530990 GBP1P32455 592 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 SEC13P55735 322 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 C1QBPQ07021 282 aaKnown RBP12.33□□□□□ -0.44
LTBP3-219ENST00000530990 FBXO43Q4G163 708 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 GRAMD4Q6IC98 578 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 ALYREFQ86V81 257 aaKnown RBP12.33□□□□□ -0.44
LTBP3-219ENST00000530990 C1orf210Q8IVY1 113 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 MCOLN2Q8IZK6 566 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 MAML2Q8IZL2 1156 aaPredicted RBP12.33□□□□□ -0.44
LTBP3-219ENST00000530990 SYNPOQ8N3V7 929 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 TERB1Q8NA31 727 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 C3orf20Q8ND61 904 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 DDI1Q8WTU0 396 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 NT5C3BQ969T7 300 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 MYEOVQ96EZ4 313 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 XPO6Q96QU8 1125 aaKnown RBP12.33□□□□□ -0.44
LTBP3-219ENST00000530990 IER2Q9BTL4 223 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 TRIM5Q9C035 493 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 PRMT8Q9NR22 394 aaPredicted RBP12.33□□□□□ -0.44
LTBP3-219ENST00000530990 C2orf42Q9NWW7 574 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 RRN3Q9NYV6 651 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 DEC1Q9P2X7 70 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 CLEC4EQ9ULY5 219 aa12.33□□□□□ -0.44
LTBP3-219ENST00000530990 MYO18AQ92614 2054 aaKnown RBP12.33□□□□□ -0.44
LTBP3-219ENST00000530990 EML5Q05BV3 1969 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 KCNU1A8MYU2 1149 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 H0Y858 1186 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 LAMTOR5O43504 91 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 MFAP3LO75121 409 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 SERPING1P05155 500 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 CHRM1P11229 460 aaPredicted RBP12.32□□□□□ -0.44
LTBP3-219ENST00000530990 RRM1P23921 792 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 CCR1P32246 355 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 GRIA2P42262 883 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 DGKGP49619 791 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 ATXN1P54253 815 aaKnown RBP12.32□□□□□ -0.44
LTBP3-219ENST00000530990 PTPN5P54829 565 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 DEUP1Q05D60 604 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 PPP2R5DQ14738 602 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 SLC25A52Q3SY17 297 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 MPPE1Q53F39 396 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 C10orf76Q5T2E6 689 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 PIK3R6Q5UE93 754 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 RAP1GAP2Q684P5 730 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 DNAJC24Q6P3W2 148 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 ARCQ7LC44 396 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 SPEM1Q8N4L4 309 aa12.32□□□□□ -0.44
LTBP3-219ENST00000530990 ATP6V0D2Q8N8Y2 350 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms