RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 SYNPO2LQ9H987 977 aa6.77□□□□□ -1.33
CASP4-208ENST00000530309 G6PC2Q9NQR9 355 aa6.77□□□□□ -1.33
CASP4-208ENST00000530309 ABHD10Q9NUJ1 306 aa6.77□□□□□ -1.33
CASP4-208ENST00000530309 ASB6Q9NWX5 421 aa6.77□□□□□ -1.33
CASP4-208ENST00000530309 ASIC5Q9NY37 505 aa6.77□□□□□ -1.33
CASP4-208ENST00000530309 FEM1BQ9UK73 627 aa6.77□□□□□ -1.33
CASP4-208ENST00000530309 DMRT1Q9Y5R6 373 aa6.77□□□□□ -1.33
CASP4-208ENST00000530309 TARM1B6A8C7 271 aa6.76□□□□□ -1.33
CASP4-208ENST00000530309 E7EVH7 732 aa6.76□□□□□ -1.33
CASP4-208ENST00000530309 H7C1Q1 480 aa6.76□□□□□ -1.33
CASP4-208ENST00000530309 ACTR2P61160 394 aa6.76□□□□□ -1.33
CASP4-208ENST00000530309 RPL15P61313 204 aaKnown RBP6.76□□□□□ -1.33
CASP4-208ENST00000530309 RBM6P78332 1123 aaKnown RBP6.76□□□□□ -1.33
CASP4-208ENST00000530309 ZNF362Q5T0B9 420 aaPredicted RBP6.76□□□□□ -1.33
CASP4-208ENST00000530309 HERC6Q8IVU3 1022 aa6.76□□□□□ -1.33
CASP4-208ENST00000530309 SARAFQ96BY9 339 aa6.76□□□□□ -1.33
CASP4-208ENST00000530309 REPS1Q96D71 796 aa6.76□□□□□ -1.33
CASP4-208ENST00000530309 HS6ST2Q96MM7 605 aa6.76□□□□□ -1.33
CASP4-208ENST00000530309 ADGRE3Q9BY15 652 aa6.76□□□□□ -1.33
CASP4-208ENST00000530309 SH3BP4Q9P0V3 963 aa6.76□□□□□ -1.33
CASP4-208ENST00000530309 KCND3Q9UK17 655 aa6.76□□□□□ -1.33
CASP4-208ENST00000530309 GTF2A1LQ9UNN4 478 aa6.76□□□□□ -1.33
CASP4-208ENST00000530309 INSL6Q9Y581 213 aa6.76□□□□□ -1.33
CASP4-208ENST00000530309 H3BNC9 293 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 EIF3FO00303 357 aaPredicted RBP6.75□□□□□ -1.33
CASP4-208ENST00000530309 FYB1O15117 783 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 KRT38O76015 456 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 TK1P04183 234 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 GPD1P21695 349 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 MAPK9P45984 424 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 PAPOLAP51003 745 aaKnown RBP6.75□□□□□ -1.33
CASP4-208ENST00000530309 EFR3AQ14156 821 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 SMAD1Q15797 465 aaKnown RBP6.75□□□□□ -1.33
CASP4-208ENST00000530309 DGAT2L7PQ6IED9 249 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 AMIGO2Q86SJ2 522 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 C2CD5Q86YS7 1000 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 SLC16A11Q8NCK7 471 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 GOLGA1Q92805 767 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 UBXN10Q96LJ8 280 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 FYTTD1Q96QD9 318 aaKnown RBP6.75□□□□□ -1.33
CASP4-208ENST00000530309 PYM1Q9BRP8 204 aaKnown RBP6.75□□□□□ -1.33
CASP4-208ENST00000530309 ELOVL1Q9BW60 279 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 RNF26Q9BY78 433 aaPredicted RBP6.75□□□□□ -1.33
CASP4-208ENST00000530309 KRTAP9-3Q9BYQ3 159 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 ABHD16BQ9H3Z7 469 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 RRN3Q9NYV6 651 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 SEMA5BQ9P283 1151 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 RAB21Q9UL25 225 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 TRPC5Q9UL62 973 aaPredicted RBP6.75□□□□□ -1.33
CASP4-208ENST00000530309 SLC12A4Q9UP95 1085 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 WNT6Q9Y6F9 365 aa6.75□□□□□ -1.33
CASP4-208ENST00000530309 TBC1D3DA0A087WVF3 549 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 TBC1D3IA0A087WXS9 549 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 TBC1D3EA0A087X179 549 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 TBC1D3KA0A087X1G2 549 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 TCRBV5S1A1TA0A578 114 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 TBC1D3BA6NDS4 549 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 TBC1D3FA6NER0 549 aaPredicted RBP6.74□□□□□ -1.33
CASP4-208ENST00000530309 MBD3L5A6NJ08 208 aaPredicted RBP6.74□□□□□ -1.33
CASP4-208ENST00000530309 TBC1D3LB9A6J9 549 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 CLIC1O00299 241 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 TFRCP02786 760 aaKnown RBP6.74□□□□□ -1.33
CASP4-208ENST00000530309 TBC1D3HP0C7X1 549 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 ATF7P17544 494 aaPredicted RBP6.74□□□□□ -1.33
CASP4-208ENST00000530309 GRK5P34947 590 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 MCM2P49736 904 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 FOXL2P58012 376 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 FAM3BP58499 235 aaPredicted RBP6.74□□□□□ -1.33
CASP4-208ENST00000530309 WDR5P61964 334 aaKnown RBP6.74□□□□□ -1.33
CASP4-208ENST00000530309 COL10A1Q03692 680 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 TLE3Q04726 772 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 KCNB1Q14721 858 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 MFSD13AQ14CX5 517 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 TAF12Q16514 161 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 TBC1D3GQ6DHY5 549 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 TBC1D3CQ6IPX1 549 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 WDR93Q6P2C0 686 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 DCDC5Q6ZRR9 648 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 TBC1D3Q8IZP1 549 aaPredicted RBP6.74□□□□□ -1.33
CASP4-208ENST00000530309 ADAMTS18Q8TE60 1221 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 TRMT61AQ96FX7 289 aaKnown RBP6.74□□□□□ -1.33
CASP4-208ENST00000530309 CCDC17Q96LX7 622 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 SEMA4GQ9NTN9 838 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 TMLHEQ9NVH6 421 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 BAG5Q9UL15 447 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 LZTS1Q9Y250 596 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 LRRFIP2Q9Y608 721 aaKnown RBP6.74□□□□□ -1.33
CASP4-208ENST00000530309 SPATA31A1Q5TZJ5 1347 aa6.74□□□□□ -1.33
CASP4-208ENST00000530309 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.73□□□□□ -1.33
CASP4-208ENST00000530309 FAM90A20PA6NIJ5 464 aa6.73□□□□□ -1.33
CASP4-208ENST00000530309 BTBD19C9JJ37 291 aa6.73□□□□□ -1.33
CASP4-208ENST00000530309 GCATO75600 419 aa6.73□□□□□ -1.33
CASP4-208ENST00000530309 CYP3A4P08684 503 aa6.73□□□□□ -1.33
CASP4-208ENST00000530309 RBM5P52756 815 aaKnown RBP eCLIP6.73□□□□□ -1.33
CASP4-208ENST00000530309 TGFB2P61812 414 aa6.73□□□□□ -1.33
CASP4-208ENST00000530309 RNASELQ05823 741 aaKnown RBP6.73□□□□□ -1.33
CASP4-208ENST00000530309 LARS2Q15031 903 aaKnown RBP6.73□□□□□ -1.33
CASP4-208ENST00000530309 TMEM65Q6PI78 240 aa6.73□□□□□ -1.33
CASP4-208ENST00000530309 SERPINA13PQ6UXR4 307 aa6.73□□□□□ -1.33
CASP4-208ENST00000530309 KYAT3Q6YP21 454 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms