RNA–Protein interactions for RNA: ENST00000528942.1

CCDC18-210, Transcript of coiled-coil domain containing 18, humanhuman

TSL 4

Gene CCDC18, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-210ENST00000528942 SLC39A13Q96H72 371 aa15.5■□□□□ 0.07
CCDC18-210ENST00000528942 NAP1L5Q96NT1 182 aaPredicted RBP15.5■□□□□ 0.07
CCDC18-210ENST00000528942 DDX50Q9BQ39 737 aaKnown RBP15.5■□□□□ 0.07
CCDC18-210ENST00000528942 SEMA4AQ9H3S1 761 aa15.5■□□□□ 0.07
CCDC18-210ENST00000528942 DDIT4Q9NX09 232 aa15.5■□□□□ 0.07
CCDC18-210ENST00000528942 ZNF292O60281 2723 aa15.5■□□□□ 0.07
CCDC18-210ENST00000528942 FAM170AA1A519 330 aa15.49■□□□□ 0.07
CCDC18-210ENST00000528942 TRIM24O15164 1050 aa15.49■□□□□ 0.07
CCDC18-210ENST00000528942 ACSL4O60488 711 aa15.49■□□□□ 0.07
CCDC18-210ENST00000528942 MOCS2O96007 188 aaPredicted RBP15.49■□□□□ 0.07
CCDC18-210ENST00000528942 CYP1A1P04798 512 aaPredicted RBP15.49■□□□□ 0.07
CCDC18-210ENST00000528942 SLC2A3P11169 496 aa15.49■□□□□ 0.07
CCDC18-210ENST00000528942 CHRNB2P17787 502 aa15.49■□□□□ 0.07
CCDC18-210ENST00000528942 HOXD9P28356 352 aaPredicted RBP15.49■□□□□ 0.07
CCDC18-210ENST00000528942 GBP1P32455 592 aa15.49■□□□□ 0.07
CCDC18-210ENST00000528942 MATKP42679 507 aa15.49■□□□□ 0.07
CCDC18-210ENST00000528942 KIR2DL1P43626 348 aaPredicted RBP15.49■□□□□ 0.07
CCDC18-210ENST00000528942 MRE11P49959 708 aa15.49■□□□□ 0.07
CCDC18-210ENST00000528942 DMC1Q14565 340 aa15.49■□□□□ 0.07
CCDC18-210ENST00000528942 NFKBIBQ15653 356 aa15.49■□□□□ 0.07
CCDC18-210ENST00000528942 FAM133BQ5BKY9 247 aaKnown RBP15.49■□□□□ 0.07
CCDC18-210ENST00000528942 TRMT11Q7Z4G4 463 aaKnown RBP15.49■□□□□ 0.07
CCDC18-210ENST00000528942 ALLCQ8N6M5 410 aa15.49■□□□□ 0.07
CCDC18-210ENST00000528942 KCNV2Q8TDN2 545 aa15.49■□□□□ 0.07
CCDC18-210ENST00000528942 BAP1Q92560 729 aa15.49■□□□□ 0.07
CCDC18-210ENST00000528942 P2RY11Q96G91 374 aa15.49■□□□□ 0.07
CCDC18-210ENST00000528942 BTN2A3PQ96KV6 586 aa15.49■□□□□ 0.07
CCDC18-210ENST00000528942 SLC2A11Q9BYW1 496 aa15.49■□□□□ 0.07
CCDC18-210ENST00000528942 IRX2Q9BZI1 471 aaPredicted RBP15.49■□□□□ 0.07
CCDC18-210ENST00000528942 SEPT11Q9NVA2 429 aaKnown RBP15.49■□□□□ 0.07
CCDC18-210ENST00000528942 STAP1Q9ULZ2 295 aa15.49■□□□□ 0.07
CCDC18-210ENST00000528942 MMP17Q9ULZ9 603 aa15.49■□□□□ 0.07
CCDC18-210ENST00000528942 SLC27A6Q9Y2P4 619 aa15.49■□□□□ 0.07
CCDC18-210ENST00000528942 SYNJ2BP-COX16A0A087WUM0 186 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 TYW5A2RUC4 315 aaKnown RBP15.48■□□□□ 0.07
CCDC18-210ENST00000528942 LRRC53A6NM62 1247 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 GFRA2O00451 464 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 TSPAN3O60637 253 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 KLF8O95600 359 aaPredicted RBP15.48■□□□□ 0.07
CCDC18-210ENST00000528942 CHRM1P11229 460 aaPredicted RBP15.48■□□□□ 0.07
CCDC18-210ENST00000528942 MMP8P22894 467 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 CCR1P32246 355 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 NOS2P35228 1153 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 TIE1P35590 1138 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 NSFP46459 744 aaKnown RBP15.48■□□□□ 0.07
CCDC18-210ENST00000528942 PITX1P78337 314 aaPredicted RBP15.48■□□□□ 0.07
CCDC18-210ENST00000528942 NR1I3Q14994 352 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 C2CD6Q53TS8 623 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 ZC3H12AQ5D1E8 599 aaKnown RBP15.48■□□□□ 0.07
CCDC18-210ENST00000528942 HEATR6Q6AI08 1181 aaKnown RBP15.48■□□□□ 0.07
CCDC18-210ENST00000528942 MMS22LQ6ZRQ5 1243 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 ANKS1BQ7Z6G8 1248 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 LONP2Q86WA8 852 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 CAMKK1Q8N5S9 505 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 ZNF513Q8N8E2 541 aaPredicted RBP15.48■□□□□ 0.07
CCDC18-210ENST00000528942 IL17RCQ8NAC3 791 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 TMA16Q96EY4 203 aaKnown RBP15.48■□□□□ 0.07
CCDC18-210ENST00000528942 HHIPQ96QV1 700 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 TSPY26PQ9H489 355 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.48■□□□□ 0.07
CCDC18-210ENST00000528942 RRN3Q9NYV6 651 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 COX16Q9P0S2 106 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 FBXO10Q9UK96 956 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 STARD13Q9Y3M8 1113 aa15.48■□□□□ 0.07
CCDC18-210ENST00000528942 PRR23AA6NEV1 266 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 GOLGA8SH3BPF8 625 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 GFRA3O60609 400 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 LILRB5O75023 590 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 APBB3O95704 486 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 CISD3P0C7P0 127 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 ABCB4P21439 1286 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 SLC6A4P31645 630 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 FNTBP49356 437 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 UBASH3AP57075 661 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 RNASE9P60153 205 aaKnown RBP15.47■□□□□ 0.07
CCDC18-210ENST00000528942 CENPCQ03188 943 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 DMWDQ09019 674 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 NME3Q13232 169 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 MTA1Q13330 715 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 EIF4EBP2Q13542 120 aaPredicted RBP15.47■□□□□ 0.07
CCDC18-210ENST00000528942 CLEC16AQ2KHT3 1053 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 FIGNQ5HY92 759 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 EOGTQ5NDL2 527 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 MPP7Q5T2T1 576 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 NADSYN1Q6IA69 706 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 RFWD3Q6PCD5 774 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 LRSAM1Q6UWE0 723 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 CCDC33Q8N5R6 958 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 ATP6V0D2Q8N8Y2 350 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 ZNF557Q8N988 423 aaPredicted RBP15.47■□□□□ 0.07
CCDC18-210ENST00000528942 TXNDC5Q8NBS9 432 aaKnown RBP15.47■□□□□ 0.07
CCDC18-210ENST00000528942 HJURPQ8NCD3 748 aaPredicted RBP15.47■□□□□ 0.07
CCDC18-210ENST00000528942 TSTD1Q8NFU3 115 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 RNF34Q969K3 372 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 PRICKLE1Q96MT3 831 aaPredicted RBP15.47■□□□□ 0.07
CCDC18-210ENST00000528942 AGPAT1Q99943 283 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 TTYH3Q9C0H2 523 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.47■□□□□ 0.07
CCDC18-210ENST00000528942 SLC12A6Q9UHW9 1150 aa15.47■□□□□ 0.07
CCDC18-210ENST00000528942 CCDC163A0A0D9SF12 145 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms