RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 E9PBE3 544 aa15.1■□□□□ 0.01
CAPN1-214ENST00000528165 POLRMTO00411 1230 aaKnown RBP15.1■□□□□ 0.01
CAPN1-214ENST00000528165 TPP1O14773 563 aa15.1■□□□□ 0.01
CAPN1-214ENST00000528165 KLHL41O60662 606 aa15.1■□□□□ 0.01
CAPN1-214ENST00000528165 NUDT2P50583 147 aa15.1■□□□□ 0.01
CAPN1-214ENST00000528165 ABCE1P61221 599 aaKnown RBP15.1■□□□□ 0.01
CAPN1-214ENST00000528165 FKBP1AP62942 108 aaKnown RBP15.1■□□□□ 0.01
CAPN1-214ENST00000528165 PRKCEQ02156 737 aa15.1■□□□□ 0.01
CAPN1-214ENST00000528165 XYLT1Q86Y38 959 aa15.1■□□□□ 0.01
CAPN1-214ENST00000528165 MPP5Q8N3R9 675 aa15.1■□□□□ 0.01
CAPN1-214ENST00000528165 MCUQ8NE86 351 aa15.1■□□□□ 0.01
CAPN1-214ENST00000528165 TMEM143Q96AN5 459 aa15.1■□□□□ 0.01
CAPN1-214ENST00000528165 SIGLEC10Q96LC7 697 aa15.1■□□□□ 0.01
CAPN1-214ENST00000528165 CPXM1Q96SM3 734 aa15.1■□□□□ 0.01
CAPN1-214ENST00000528165 PDCD2LQ9BRP1 358 aa15.1■□□□□ 0.01
CAPN1-214ENST00000528165 MTMR12Q9C0I1 747 aa15.1■□□□□ 0.01
CAPN1-214ENST00000528165 BCAP29Q9UHQ4 241 aa15.1■□□□□ 0.01
CAPN1-214ENST00000528165 PRPF19Q9UMS4 504 aaKnown RBP15.1■□□□□ 0.01
CAPN1-214ENST00000528165 ZNF195O14628 629 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 AIM2O14862 343 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 RALBP11234 206 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 MAGEA6P43360 314 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 AP3M2P53677 418 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 TRPC3Q13507 836 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 PDE1CQ14123 709 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-214ENST00000528165 LPIN1Q14693 890 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 ACAP1Q15027 740 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 USP41Q3LFD5 358 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 ARHGEF16Q5VV41 709 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 TRIM67Q6ZTA4 783 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 LRRC43Q8N309 656 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 GALNT4Q8N4A0 578 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 SLC4A11Q8NBS3 891 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 RTP4Q96DX8 246 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 PRMT6Q96LA8 375 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-214ENST00000528165 PEBP4Q96S96 227 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 PCDHGA4Q9Y5G9 962 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 CEPT1Q9Y6K0 416 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 MED7O43513 233 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 ZBTB14O43829 449 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 PIGRP01833 764 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 ALDOAP04075 364 aaKnown RBP15.09■□□□□ 0.01
CAPN1-214ENST00000528165 ERBB2P04626 1255 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 PSAPP07602 524 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 TGFB2P61812 414 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 EMC2Q15006 297 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 SH3D19Q5HYK7 790 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 C16orf89Q6UX73 402 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 ATG14Q6ZNE5 492 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 AMIGO2Q86SJ2 522 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 PLD5Q8N7P1 536 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 RNF157Q96PX1 679 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 PHF12Q96QT6 1004 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 GLIS2Q9BZE0 524 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-214ENST00000528165 LHX5Q9H2C1 402 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 RAVER2Q9HCJ3 691 aaKnown RBP15.09■□□□□ 0.01
CAPN1-214ENST00000528165 MAN1C1Q9NR34 630 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 RSL24D1Q9UHA3 163 aaKnown RBP15.09■□□□□ 0.01
CAPN1-214ENST00000528165 RIMS3Q9UJD0 308 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 PADI4Q9UM07 663 aa15.09■□□□□ 0.01
CAPN1-214ENST00000528165 NRXN2Q9P2S2 1712 aa15.08■□□□□ 0.01
CAPN1-214ENST00000528165 MAGEB3O15480 346 aa15.08■□□□□ 0.01
CAPN1-214ENST00000528165 ATG7O95352 703 aa15.08■□□□□ 0.01
CAPN1-214ENST00000528165 MAP3K6O95382 1288 aa15.08■□□□□ 0.01
CAPN1-214ENST00000528165 ITGBL1O95965 494 aaPredicted RBP15.08■□□□□ 0.01
CAPN1-214ENST00000528165 BCAR1P56945 870 aa15.08■□□□□ 0.01
CAPN1-214ENST00000528165 GHRHRQ02643 423 aa15.08■□□□□ 0.01
CAPN1-214ENST00000528165 VPS72Q15906 364 aa15.08■□□□□ 0.01
CAPN1-214ENST00000528165 KLHL35Q6PF15 583 aa15.08■□□□□ 0.01
CAPN1-214ENST00000528165 WDR49Q8IV35 697 aa15.08■□□□□ 0.01
CAPN1-214ENST00000528165 LENG8Q96PV6 779 aaPredicted RBP15.08■□□□□ 0.01
CAPN1-214ENST00000528165 HAUS8Q9BT25 410 aa15.08■□□□□ 0.01
CAPN1-214ENST00000528165 COG4Q9H9E3 785 aa15.08■□□□□ 0.01
CAPN1-214ENST00000528165 PXMP2Q9NR77 195 aa15.08■□□□□ 0.01
CAPN1-214ENST00000528165 PPP1R1BQ9UD71 204 aaPredicted RBP15.08■□□□□ 0.01
CAPN1-214ENST00000528165 FAF1Q9UNN5 650 aaPredicted RBP15.08■□□□□ 0.01
CAPN1-214ENST00000528165 ENDOD1O94919 500 aa15.08■□□□□ 0
CAPN1-214ENST00000528165 ARRB2P32121 409 aa15.08■□□□□ 0
CAPN1-214ENST00000528165 MAGEA3P43357 314 aa15.08■□□□□ 0
CAPN1-214ENST00000528165 HARS2P49590 506 aaKnown RBP15.08■□□□□ 0
CAPN1-214ENST00000528165 TICAM1Q8IUC6 712 aa15.08■□□□□ 0
CAPN1-214ENST00000528165 RNF168Q8IYW5 571 aaPredicted RBP15.08■□□□□ 0
CAPN1-214ENST00000528165 HSPBAP1Q96EW2 488 aa15.08■□□□□ 0
CAPN1-214ENST00000528165 COPG2Q9UBF2 871 aa15.08■□□□□ 0
CAPN1-214ENST00000528165 CDY2AQ9Y6F7 541 aa15.08■□□□□ 0
CAPN1-214ENST00000528165 CDY1Q9Y6F8 540 aa15.08■□□□□ 0
CAPN1-214ENST00000528165 APOL1O14791 398 aa15.07■□□□□ 0
CAPN1-214ENST00000528165 THRAP10827 490 aa15.07■□□□□ 0
CAPN1-214ENST00000528165 SERPINB5P36952 375 aa15.07■□□□□ 0
CAPN1-214ENST00000528165 CDKL1Q00532 357 aa15.07■□□□□ 0
CAPN1-214ENST00000528165 ZNF699Q32M78 642 aa15.07■□□□□ 0
CAPN1-214ENST00000528165 LRRC8BQ6P9F7 803 aa15.07■□□□□ 0
CAPN1-214ENST00000528165 BNC2Q6ZN30 1099 aaPredicted RBP15.07■□□□□ 0
CAPN1-214ENST00000528165 ERI1Q8IV48 349 aaKnown RBP15.07■□□□□ 0
CAPN1-214ENST00000528165 TRIML2Q8N7C3 387 aa15.07■□□□□ 0
CAPN1-214ENST00000528165 KYQ8NBH2 561 aa15.07■□□□□ 0
CAPN1-214ENST00000528165 FNDC8Q8TC99 324 aa15.07■□□□□ 0
CAPN1-214ENST00000528165 ADPGKQ9BRR6 497 aa15.07■□□□□ 0
CAPN1-214ENST00000528165 RNPEPQ9H4A4 650 aa15.07■□□□□ 0
CAPN1-214ENST00000528165 XPNPEP3Q9NQH7 507 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms