RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 SLC11A2P49281 568 aa20.08■□□□□ 0.81
CAPN1-211ENST00000527739 MAP7D1Q3KQU3 841 aa20.08■□□□□ 0.81
CAPN1-211ENST00000527739 ADGRF1Q5T601 910 aa20.08■□□□□ 0.81
CAPN1-211ENST00000527739 ANKS1BQ7Z6G8 1248 aa20.08■□□□□ 0.81
CAPN1-211ENST00000527739 UNC45BQ8IWX7 931 aa20.08■□□□□ 0.81
CAPN1-211ENST00000527739 ELOVL2Q9NXB9 296 aa20.08■□□□□ 0.81
CAPN1-211ENST00000527739 APEX2Q9UBZ4 518 aa20.08■□□□□ 0.81
CAPN1-211ENST00000527739 MBD1Q9UIS9 605 aaPredicted RBP20.08■□□□□ 0.81
CAPN1-211ENST00000527739 STON1Q9Y6Q2 735 aa20.08■□□□□ 0.81
CAPN1-211ENST00000527739 GOLGA6L7A0A1B0GV03 622 aa20.07■□□□□ 0.8
CAPN1-211ENST00000527739 GFRA2O00451 464 aa20.07■□□□□ 0.8
CAPN1-211ENST00000527739 SART1O43290 800 aaKnown RBP20.07■□□□□ 0.8
CAPN1-211ENST00000527739 STARD3Q14849 445 aa20.07■□□□□ 0.8
CAPN1-211ENST00000527739 MAN2A1Q16706 1144 aa20.07■□□□□ 0.8
CAPN1-211ENST00000527739 ST3GAL2Q16842 350 aa20.07■□□□□ 0.8
CAPN1-211ENST00000527739 MSANTD2Q6P1R3 559 aa20.07■□□□□ 0.8
CAPN1-211ENST00000527739 RFWD3Q6PCD5 774 aa20.07■□□□□ 0.8
CAPN1-211ENST00000527739 KIAA1324Q6UXG2 1013 aaKnown RBP20.07■□□□□ 0.8
CAPN1-211ENST00000527739 FAM217AQ8IXS0 508 aa20.07■□□□□ 0.8
CAPN1-211ENST00000527739 ADAM32Q8TC27 787 aa20.07■□□□□ 0.8
CAPN1-211ENST00000527739 SORCS1Q8WY21 1168 aa20.07■□□□□ 0.8
CAPN1-211ENST00000527739 PIWIL1Q96J94 861 aaKnown RBP20.07■□□□□ 0.8
CAPN1-211ENST00000527739 GABRG3Q99928 467 aa20.07■□□□□ 0.8
CAPN1-211ENST00000527739 SLC2A11Q9BYW1 496 aa20.07■□□□□ 0.8
CAPN1-211ENST00000527739 SLC6A17Q9H1V8 727 aa20.07■□□□□ 0.8
CAPN1-211ENST00000527739 CYP8B1Q9UNU6 501 aa20.07■□□□□ 0.8
CAPN1-211ENST00000527739 NAALADL1Q9UQQ1 740 aa20.07■□□□□ 0.8
CAPN1-211ENST00000527739 SPAG17Q6Q759 2223 aa20.06■□□□□ 0.8
CAPN1-211ENST00000527739 KHNYNO15037 678 aaKnown RBP20.06■□□□□ 0.8
CAPN1-211ENST00000527739 SYNCRIPO60506 623 aaKnown RBP20.06■□□□□ 0.8
CAPN1-211ENST00000527739 LATS1O95835 1130 aa20.06■□□□□ 0.8
CAPN1-211ENST00000527739 NDUFV2P19404 249 aa20.06■□□□□ 0.8
CAPN1-211ENST00000527739 ERCC5P28715 1186 aaPredicted RBP20.06■□□□□ 0.8
CAPN1-211ENST00000527739 LIMK1P53667 647 aa20.06■□□□□ 0.8
CAPN1-211ENST00000527739 RPL6Q02878 288 aaKnown RBP20.06■□□□□ 0.8
CAPN1-211ENST00000527739 N4BP2L1Q5TBK1 243 aaPredicted RBP20.06■□□□□ 0.8
CAPN1-211ENST00000527739 STPG1Q5TH74 334 aa20.06■□□□□ 0.8
CAPN1-211ENST00000527739 NUGGCQ68CJ6 796 aa20.06■□□□□ 0.8
CAPN1-211ENST00000527739 RNF43Q68DV7 783 aa20.06■□□□□ 0.8
CAPN1-211ENST00000527739 TUBGCP2Q9BSJ2 902 aa20.06■□□□□ 0.8
CAPN1-211ENST00000527739 STIM2Q9P246 746 aa20.06■□□□□ 0.8
CAPN1-211ENST00000527739 THAP10Q9P2Z0 257 aaPredicted RBP20.06■□□□□ 0.8
CAPN1-211ENST00000527739 DNAJC12Q9UKB3 198 aa20.06■□□□□ 0.8
CAPN1-211ENST00000527739 GTPBP10A4D1E9 387 aaKnown RBP20.05■□□□□ 0.8
CAPN1-211ENST00000527739 BECN2A8MW95 431 aa20.05■□□□□ 0.8
CAPN1-211ENST00000527739 E5RJQ4 531 aa20.05■□□□□ 0.8
CAPN1-211ENST00000527739 ACSL4O60488 711 aa20.05■□□□□ 0.8
CAPN1-211ENST00000527739 TBL1XO60907 577 aa20.05■□□□□ 0.8
CAPN1-211ENST00000527739 ZNF217O75362 1048 aa20.05■□□□□ 0.8
CAPN1-211ENST00000527739 HOXD9P28356 352 aaPredicted RBP20.05■□□□□ 0.8
CAPN1-211ENST00000527739 IL12RB1P42701 662 aa20.05■□□□□ 0.8
CAPN1-211ENST00000527739 PTGER3P43115 390 aa20.05■□□□□ 0.8
CAPN1-211ENST00000527739 ZNF445P59923 1031 aa20.05■□□□□ 0.8
CAPN1-211ENST00000527739 PTK2Q05397 1052 aa20.05■□□□□ 0.8
CAPN1-211ENST00000527739 VWA3BQ502W6 1294 aa20.05■□□□□ 0.8
CAPN1-211ENST00000527739 SLC36A4Q6YBV0 504 aa20.05■□□□□ 0.8
CAPN1-211ENST00000527739 PASD1Q8IV76 773 aa20.05■□□□□ 0.8
CAPN1-211ENST00000527739 DQX1Q8TE96 717 aaKnown RBP20.05■□□□□ 0.8
CAPN1-211ENST00000527739 STK32AQ8WU08 396 aa20.05■□□□□ 0.8
CAPN1-211ENST00000527739 SERPINB11Q96P15 392 aa20.05■□□□□ 0.8
CAPN1-211ENST00000527739 SLC4A5Q9BY07 1137 aa20.05■□□□□ 0.8
CAPN1-211ENST00000527739 NDST4Q9H3R1 872 aa20.05■□□□□ 0.8
CAPN1-211ENST00000527739 LMBRD1Q9NUN5 540 aa20.05■□□□□ 0.8
CAPN1-211ENST00000527739 CYTH4Q9UIA0 394 aa20.05■□□□□ 0.8
CAPN1-211ENST00000527739 STOML2Q9UJZ1 356 aa20.05■□□□□ 0.8
CAPN1-211ENST00000527739 KIAA1549LQ6ZVL6 1849 aa20.04■□□□□ 0.8
CAPN1-211ENST00000527739 USP24Q9UPU5 2620 aa20.04■□□□□ 0.8
CAPN1-211ENST00000527739 PATE3B3GLJ2 98 aa20.04■□□□□ 0.8
CAPN1-211ENST00000527739 AP5Z1O43299 807 aa20.04■□□□□ 0.8
CAPN1-211ENST00000527739 TIMM44O43615 452 aa20.04■□□□□ 0.8
CAPN1-211ENST00000527739 MOCS2O96007 188 aaPredicted RBP20.04■□□□□ 0.8
CAPN1-211ENST00000527739 FYNP06241 537 aa20.04■□□□□ 0.8
CAPN1-211ENST00000527739 ZNF234Q14588 700 aa20.04■□□□□ 0.8
CAPN1-211ENST00000527739 EIF4HQ15056 248 aaKnown RBP20.04■□□□□ 0.8
CAPN1-211ENST00000527739 E2F5Q15329 346 aa20.04■□□□□ 0.8
CAPN1-211ENST00000527739 SYPL2Q5VXT5 272 aa20.04■□□□□ 0.8
CAPN1-211ENST00000527739 LYSMD4Q5XG99 296 aa20.04■□□□□ 0.8
CAPN1-211ENST00000527739 SHC3Q92529 594 aa20.04■□□□□ 0.8
CAPN1-211ENST00000527739 DDX50Q9BQ39 737 aaKnown RBP20.04■□□□□ 0.8
CAPN1-211ENST00000527739 EDEM2Q9BV94 578 aa20.04■□□□□ 0.8
CAPN1-211ENST00000527739 TRIM62Q9BVG3 475 aa20.04■□□□□ 0.8
CAPN1-211ENST00000527739 ABCB8Q9NUT2 735 aa20.04■□□□□ 0.8
CAPN1-211ENST00000527739 KCNJ18B7U540 433 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 NPC1O15118 1278 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 PAPSS1O43252 624 aaPredicted RBP20.03■□□□□ 0.8
CAPN1-211ENST00000527739 NDUFS2O75306 463 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 IGLV3-27P01718 113 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 EPHX1P07099 455 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 PMLP29590 882 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 KRT9P35527 623 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 RPL34P49207 117 aaKnown RBP20.03■□□□□ 0.8
CAPN1-211ENST00000527739 SGSHP51688 502 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 RING1Q06587 406 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 PDCLQ13371 301 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 KCNJ12Q14500 433 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 MEA1Q16626 185 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 FUT11Q495W5 492 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 FNDC3BQ53EP0 1204 aaKnown RBP20.03■□□□□ 0.8
CAPN1-211ENST00000527739 PIK3R6Q5UE93 754 aa20.03■□□□□ 0.8
CAPN1-211ENST00000527739 SERPINA13PQ6UXR4 307 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms