RNA–Protein interactions for RNA: ENST00000527142.5

SYVN1-208, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-208ENST00000527142 PCMTD1Q96MG8 357 aaPredicted RBP11.2□□□□□ -0.62
SYVN1-208ENST00000527142 DDX50Q9BQ39 737 aaKnown RBP11.2□□□□□ -0.62
SYVN1-208ENST00000527142 TMEM51Q9NW97 253 aa11.2□□□□□ -0.62
SYVN1-208ENST00000527142 EBF1Q9UH73 591 aa11.2□□□□□ -0.62
SYVN1-208ENST00000527142 SMG5Q9UPR3 1016 aaKnown RBP11.2□□□□□ -0.62
SYVN1-208ENST00000527142 NAALADL1Q9UQQ1 740 aa11.2□□□□□ -0.62
SYVN1-208ENST00000527142 NPC1O15118 1278 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 DAB1O75553 588 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 GFPT2O94808 682 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 KLF8O95600 359 aaPredicted RBP11.19□□□□□ -0.62
SYVN1-208ENST00000527142 TRUB2O95900 331 aaKnown RBP11.19□□□□□ -0.62
SYVN1-208ENST00000527142 APOEP02649 317 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 ERBB2P04626 1255 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 CISD3P0C7P0 127 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 HOXD9P28356 352 aaPredicted RBP11.19□□□□□ -0.62
SYVN1-208ENST00000527142 GABRB2P47870 512 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 TPM4P67936 248 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 CDK17Q00537 523 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 SLC6A3Q01959 620 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 DMWDQ09019 674 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 IQCB1Q15051 598 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 FILIP1LQ4L180 1135 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 FAM133BQ5BKY9 247 aaKnown RBP11.19□□□□□ -0.62
SYVN1-208ENST00000527142 TAF3Q5VWG9 929 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 SYPL2Q5VXT5 272 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 ANKS1BQ7Z6G8 1248 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 SFTPA1Q8IWL2 248 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 ALLCQ8N6M5 410 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 ZNF513Q8N8E2 541 aaPredicted RBP11.19□□□□□ -0.62
SYVN1-208ENST00000527142 HJURPQ8NCD3 748 aaPredicted RBP11.19□□□□□ -0.62
SYVN1-208ENST00000527142 DDI1Q8WTU0 396 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 BHMTQ93088 406 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 P2RY11Q96G91 374 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 HHIPQ96QV1 700 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 FAM204AQ9H8W3 233 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 NLRC4Q9NPP4 1024 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 RTN4Q9NQC3 1192 aaKnown RBP11.19□□□□□ -0.62
SYVN1-208ENST00000527142 RRN3Q9NYV6 651 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 TJP2Q9UDY2 1190 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 RAB23Q9ULC3 237 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 MYO6Q9UM54 1294 aa11.19□□□□□ -0.62
SYVN1-208ENST00000527142 A0A1B0GTH6 734 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 A0A1W2PQC6 194 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 TYW5A2RUC4 315 aaKnown RBP11.18□□□□□ -0.62
SYVN1-208ENST00000527142 TRIM24O15164 1050 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 AXIN1O15169 862 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 ACSL4O60488 711 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 ALDH1A2O94788 518 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 GBP1P32455 592 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 TIE1P35590 1138 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 NOMO3P69849 1222 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 EIF4EBP2Q13542 120 aaPredicted RBP11.18□□□□□ -0.62
SYVN1-208ENST00000527142 TAF5Q15542 800 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 CRY1Q16526 586 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 ZSCAN23Q3MJ62 389 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 DCAF6Q58WW2 860 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 HEATR6Q6AI08 1181 aaKnown RBP11.18□□□□□ -0.62
SYVN1-208ENST00000527142 LAIR1Q6GTX8 287 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 OR6B2Q6IFH4 312 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 ERICH1Q86X53 443 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 CCDC33Q8N5R6 958 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 TXNDC5Q8NBS9 432 aaKnown RBP11.18□□□□□ -0.62
SYVN1-208ENST00000527142 ADAM32Q8TC27 787 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 SLC20A1Q8WUM9 679 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 GAB3Q8WWW8 586 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 RUBCNQ92622 972 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 C18orf8Q96DM3 657 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 TMA16Q96EY4 203 aaKnown RBP11.18□□□□□ -0.62
SYVN1-208ENST00000527142 BTN2A3PQ96KV6 586 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 DDIT4Q9NX09 232 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 PLK2Q9NYY3 685 aa11.18□□□□□ -0.62
SYVN1-208ENST00000527142 SGK1O00141 431 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 TIMM44O43615 452 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 ADAM23O75077 832 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 RPP40O75818 363 aaKnown RBP11.17□□□□□ -0.62
SYVN1-208ENST00000527142 CYP1A1P04798 512 aaPredicted RBP11.17□□□□□ -0.62
SYVN1-208ENST00000527142 MMEP08473 750 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 CCDC172P0C7W6 258 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 HNRNPLP14866 589 aaKnown RBP eCLIP11.17□□□□□ -0.62
SYVN1-208ENST00000527142 MMP8P22894 467 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 NTSR1P30989 418 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 CCR1P32246 355 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 NOS2P35228 1153 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 MATKP42679 507 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 FMO1Q01740 532 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 SIM2Q14190 667 aaPredicted RBP11.17□□□□□ -0.62
SYVN1-208ENST00000527142 PIK3R6Q5UE93 754 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 TTC39BQ5VTQ0 682 aaPredicted RBP11.17□□□□□ -0.62
SYVN1-208ENST00000527142 NAA35Q5VZE5 725 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 EGFLAMQ63HQ2 1017 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 ARCQ7LC44 396 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 CACNA2D4Q7Z3S7 1137 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 C11orf74Q86VG3 221 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 RASSF3Q86WH2 238 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 XYLT1Q86Y38 959 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 DEFB106AQ8N104 65 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.17□□□□□ -0.62
SYVN1-208ENST00000527142 WFIKKN2Q8TEU8 576 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 UCMAQ8WVF2 138 aa11.17□□□□□ -0.62
SYVN1-208ENST00000527142 GABRG3Q99928 467 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms