RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 NAALADL1Q9UQQ1 740 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 MCM3APO60318 1980 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 KIAA1217Q5T5P2 1943 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 SOCS7O14512 581 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 PHBP35232 272 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 VHLP40337 213 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 CACNB2Q08289 660 aaPredicted RBP10.18□□□□□ -0.78
USP35-201ENST00000526425 RAB6CQ53S08 254 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 ATXN7L3BQ96GX2 97 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 TUBGCP5Q96RT8 1024 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 SLC13A1Q9BZW2 595 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 RAB6CQ9H0N0 254 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 TRABDQ9H4I3 376 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 LRRC19Q9H756 370 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 TMED5Q9Y3A6 229 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 LINC00854A0A1B0GVQ3 168 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 A6NL46 340 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 NOTOA8MTQ0 251 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 I3L4J1 428 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 ATP9BO43861 1147 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 PENKP01210 267 aaPredicted RBP10.18□□□□□ -0.78
USP35-201ENST00000526425 TPBGLP0DKB5 382 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 SESN2P58004 480 aaPredicted RBP10.18□□□□□ -0.78
USP35-201ENST00000526425 DNAJC3Q13217 504 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 AUHQ13825 339 aaKnown RBP10.18□□□□□ -0.78
USP35-201ENST00000526425 PPP1R26Q5T8A7 1209 aaPredicted RBP10.18□□□□□ -0.78
USP35-201ENST00000526425 PLEKHA7Q6IQ23 1121 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 TAPT1Q6NXT6 567 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 NOTUMQ6P988 496 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 FAM183BPQ6ZVS7 135 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 DQX1Q8TE96 717 aaKnown RBP10.18□□□□□ -0.78
USP35-201ENST00000526425 ERP27Q96DN0 273 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 PITPNM3Q9BZ71 974 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 SIK2Q9H0K1 926 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 WHRNQ9P202 907 aa10.18□□□□□ -0.78
USP35-201ENST00000526425 USP15Q9Y4E8 981 aaPredicted RBP10.18□□□□□ -0.78
USP35-201ENST00000526425 CITO14578 2027 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 CCDC195A0A1B0GUA6 201 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 TEX28O15482 410 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 B3GALNT1O75752 331 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 KRT75O95678 551 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 PGK1P00558 417 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 MT-ND3P03897 115 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 MCF2P10911 925 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 VDRP11473 427 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 ARL4AP40617 200 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 GAD2Q05329 585 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 AP1B1Q10567 949 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 CRHR2Q13324 411 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 CCL14Q16627 93 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 TJAP1Q5JTD0 557 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 ARHGEF18Q6ZSZ5 1173 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 KATNAL2Q8IYT4 538 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 C7orf57Q8NEG2 295 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 ZFP42Q96MM3 310 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 VPS51Q9UID3 782 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 SIX4Q9UIU6 781 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 NENFQ9UMX5 172 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 LRRC42Q9Y546 428 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 CFAP69A5D8W1 941 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 CLDN5O00501 218 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 LIASO43766 372 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 LRCH4O75427 683 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 ITGBL1O95965 494 aaPredicted RBP10.17□□□□□ -0.78
USP35-201ENST00000526425 MMP3P08254 477 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 GSTA1P08263 222 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 ASPAP45381 313 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 ATXN1P54253 815 aaKnown RBP10.17□□□□□ -0.78
USP35-201ENST00000526425 VCPP55072 806 aaKnown RBP10.17□□□□□ -0.78
USP35-201ENST00000526425 IL9RQ01113 521 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 WASHC5Q12768 1159 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 TFDP2Q14188 446 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 TMTC4Q5T4D3 741 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 RNF19BQ6ZMZ0 732 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 ANKS1BQ7Z6G8 1248 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 SLC4A11Q8NBS3 891 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 HIPK4Q8NE63 616 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 APPL2Q8NEU8 664 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 ART4Q93070 314 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 SNX27Q96L92 541 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 APBA2Q99767 749 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 HEPHQ9BQS7 1158 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 KATNAL1Q9BW62 490 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 C12orf65Q9H3J6 166 aaKnown RBP10.17□□□□□ -0.78
USP35-201ENST00000526425 PRM3Q9NNZ6 103 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 COMMD3-BMI1R4GMX3 469 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 MYO18AQ92614 2054 aaKnown RBP10.17□□□□□ -0.78
USP35-201ENST00000526425 CASTOR2A6NHX0 329 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 E7ENQ6 273 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 TREHO43280 583 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 CDH16O75309 829 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 KRT36O76013 467 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 HAUS5O94927 633 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 LSM8O95777 96 aaKnown RBP10.17□□□□□ -0.78
USP35-201ENST00000526425 IL1R2P27930 398 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 TAP1Q03518 808 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 PPIDQ08752 370 aaKnown RBP10.17□□□□□ -0.78
USP35-201ENST00000526425 DCTN2Q13561 401 aaKnown RBP10.17□□□□□ -0.78
USP35-201ENST00000526425 CCDC142Q17RM4 750 aa10.17□□□□□ -0.78
USP35-201ENST00000526425 CXCL17Q6UXB2 119 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms