RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 PDXDC1Q6P996 788 aa4.76□□□□□ -1.65
CSDE1-210ENST00000525878 KRT28Q7Z3Y7 464 aa4.76□□□□□ -1.65
CSDE1-210ENST00000525878 RAVER1Q8IY67 606 aaKnown RBP4.76□□□□□ -1.65
CSDE1-210ENST00000525878 TCEAL8Q8IYN2 117 aa4.76□□□□□ -1.65
CSDE1-210ENST00000525878 TMEM199Q8N511 208 aa4.76□□□□□ -1.65
CSDE1-210ENST00000525878 ARL14EPQ8N8R7 260 aaPredicted RBP4.76□□□□□ -1.65
CSDE1-210ENST00000525878 TTLL2Q9BWV7 592 aa4.76□□□□□ -1.65
CSDE1-210ENST00000525878 MYLK2Q9H1R3 596 aa4.76□□□□□ -1.65
CSDE1-210ENST00000525878 DDX20Q9UHI6 824 aaKnown RBP4.76□□□□□ -1.65
CSDE1-210ENST00000525878 NOB1Q9ULX3 412 aaKnown RBP4.76□□□□□ -1.65
CSDE1-210ENST00000525878 PCDHB2Q9Y5E7 798 aa4.76□□□□□ -1.65
CSDE1-210ENST00000525878 ANKRD62A6NC57 917 aa4.75□□□□□ -1.65
CSDE1-210ENST00000525878 TTC34A8MYJ7 566 aa4.75□□□□□ -1.65
CSDE1-210ENST00000525878 F8W8V4 182 aa4.75□□□□□ -1.65
CSDE1-210ENST00000525878 TPP1O14773 563 aa4.75□□□□□ -1.65
CSDE1-210ENST00000525878 IL18RAPO95256 599 aa4.75□□□□□ -1.65
CSDE1-210ENST00000525878 RPL17P18621 184 aaKnown RBP4.75□□□□□ -1.65
CSDE1-210ENST00000525878 DMWDQ09019 674 aa4.75□□□□□ -1.65
CSDE1-210ENST00000525878 PGM5Q15124 567 aa4.75□□□□□ -1.65
CSDE1-210ENST00000525878 ABLIM2Q6H8Q1 611 aa4.75□□□□□ -1.65
CSDE1-210ENST00000525878 DARS2Q6PI48 645 aaKnown RBP4.75□□□□□ -1.65
CSDE1-210ENST00000525878 TRAPPC11Q7Z392 1133 aa4.75□□□□□ -1.65
CSDE1-210ENST00000525878 SRGAP1Q7Z6B7 1085 aa4.75□□□□□ -1.65
CSDE1-210ENST00000525878 IQCF1Q8N6M8 205 aa4.75□□□□□ -1.65
CSDE1-210ENST00000525878 MAGEB6Q8N7X4 407 aa4.75□□□□□ -1.65
CSDE1-210ENST00000525878 STRBPQ96SI9 672 aaKnown RBP4.75□□□□□ -1.65
CSDE1-210ENST00000525878 WDR83Q9BRX9 315 aaKnown RBP4.75□□□□□ -1.65
CSDE1-210ENST00000525878 ANXA2P07355 339 aaKnown RBP4.74□□□□□ -1.65
CSDE1-210ENST00000525878 PEX2P28328 305 aa4.74□□□□□ -1.65
CSDE1-210ENST00000525878 IGHMBP2P38935 993 aaKnown RBP4.74□□□□□ -1.65
CSDE1-210ENST00000525878 FAM193AP78312 1265 aa4.74□□□□□ -1.65
CSDE1-210ENST00000525878 NFE2Q16621 373 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-210ENST00000525878 ARHGAP29Q52LW3 1261 aa4.74□□□□□ -1.65
CSDE1-210ENST00000525878 KYAT3Q6YP21 454 aaKnown RBP4.74□□□□□ -1.65
CSDE1-210ENST00000525878 CCDC149Q6ZUS6 474 aa4.74□□□□□ -1.65
CSDE1-210ENST00000525878 USP43Q70EL4 1123 aa4.74□□□□□ -1.65
CSDE1-210ENST00000525878 FBXL14Q8N1E6 418 aa4.74□□□□□ -1.65
CSDE1-210ENST00000525878 CLASRPQ8N2M8 674 aaKnown RBP4.74□□□□□ -1.65
CSDE1-210ENST00000525878 ASB12Q8WXK4 309 aa4.74□□□□□ -1.65
CSDE1-210ENST00000525878 KAT2BQ92831 832 aa4.74□□□□□ -1.65
CSDE1-210ENST00000525878 NTPCRQ9BSD7 190 aaKnown RBP4.74□□□□□ -1.65
CSDE1-210ENST00000525878 BTBD1Q9H0C5 482 aa4.74□□□□□ -1.65
CSDE1-210ENST00000525878 ZBTB26Q9HCK0 441 aa4.74□□□□□ -1.65
CSDE1-210ENST00000525878 ERVK-5Q9HDB9 667 aa4.74□□□□□ -1.65
CSDE1-210ENST00000525878 HEYLQ9NQ87 328 aaPredicted RBP4.74□□□□□ -1.65
CSDE1-210ENST00000525878 TBC1D23Q9NUY8 699 aa4.74□□□□□ -1.65
CSDE1-210ENST00000525878 EMSYQ7Z589 1322 aa4.73□□□□□ -1.65
CSDE1-210ENST00000525878 TCF20Q9UGU0 1960 aaKnown RBP4.73□□□□□ -1.65
CSDE1-210ENST00000525878 A6NNC1 897 aa4.73□□□□□ -1.65
CSDE1-210ENST00000525878 MGEA5O60502 916 aa4.73□□□□□ -1.65
CSDE1-210ENST00000525878 SCGB1D2O95969 90 aa4.73□□□□□ -1.65
CSDE1-210ENST00000525878 WNT1P04628 370 aa4.73□□□□□ -1.65
CSDE1-210ENST00000525878 ENO1P06733 434 aaKnown RBP4.73□□□□□ -1.65
CSDE1-210ENST00000525878 YY1P25490 414 aa4.73□□□□□ -1.65
CSDE1-210ENST00000525878 ATICP31939 592 aa4.73□□□□□ -1.65
CSDE1-210ENST00000525878 STAT6P42226 847 aa4.73□□□□□ -1.65
CSDE1-210ENST00000525878 KIAA0753Q2KHM9 967 aa4.73□□□□□ -1.65
CSDE1-210ENST00000525878 ZNF628Q5EBL2 1059 aa4.73□□□□□ -1.65
CSDE1-210ENST00000525878 ZNF474Q6S9Z5 364 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-210ENST00000525878 RNF44Q7L0R7 432 aa4.73□□□□□ -1.65
CSDE1-210ENST00000525878 RBM23Q86U06 439 aaKnown RBP4.73□□□□□ -1.65
CSDE1-210ENST00000525878 RHPN2Q8IUC4 686 aa4.73□□□□□ -1.65
CSDE1-210ENST00000525878 SPATA2LQ8IUW3 424 aaPredicted RBP4.73□□□□□ -1.65
CSDE1-210ENST00000525878 LAS2Q8IYD9 372 aa4.73□□□□□ -1.65
CSDE1-210ENST00000525878 OR52L2PQ8NGH6 319 aa4.73□□□□□ -1.65
CSDE1-210ENST00000525878 ABHD5Q8WTS1 349 aa4.73□□□□□ -1.65
CSDE1-210ENST00000525878 ZFPM2Q8WW38 1151 aa4.73□□□□□ -1.65
CSDE1-210ENST00000525878 EME1Q96AY2 570 aa4.73□□□□□ -1.65
CSDE1-210ENST00000525878 RBM38Q9H0Z9 239 aaKnown RBP4.73□□□□□ -1.65
CSDE1-210ENST00000525878 ANAPC4Q9UJX5 808 aa4.73□□□□□ -1.65
CSDE1-210ENST00000525878 TNFRSF13BO14836 293 aaPredicted RBP4.72□□□□□ -1.65
CSDE1-210ENST00000525878 KCNQ3O43525 872 aa4.72□□□□□ -1.65
CSDE1-210ENST00000525878 MMP8P22894 467 aa4.72□□□□□ -1.65
CSDE1-210ENST00000525878 AGTR2P50052 363 aa4.72□□□□□ -1.65
CSDE1-210ENST00000525878 IGBP1P78318 339 aa4.72□□□□□ -1.65
CSDE1-210ENST00000525878 SEMA5AQ13591 1074 aa4.72□□□□□ -1.65
CSDE1-210ENST00000525878 KEAP1Q14145 624 aa4.72□□□□□ -1.65
CSDE1-210ENST00000525878 TMEM196Q5HYL7 178 aa4.72□□□□□ -1.65
CSDE1-210ENST00000525878 ISM2Q6H9L7 571 aa4.72□□□□□ -1.65
CSDE1-210ENST00000525878 CAPRIN2Q6IMN6 1127 aaKnown RBP4.72□□□□□ -1.65
CSDE1-210ENST00000525878 CYB5RLQ6IPT4 315 aa4.72□□□□□ -1.65
CSDE1-210ENST00000525878 ACSM6Q6P461 480 aa4.72□□□□□ -1.65
CSDE1-210ENST00000525878 TLDC1Q6P9B6 456 aa4.72□□□□□ -1.65
CSDE1-210ENST00000525878 GLMPQ8WWB7 406 aa4.72□□□□□ -1.65
CSDE1-210ENST00000525878 OVCA2Q8WZ82 227 aa4.72□□□□□ -1.65
CSDE1-210ENST00000525878 UNKQ9C0B0 810 aaKnown RBP4.72□□□□□ -1.65
CSDE1-210ENST00000525878 EVPLQ92817 2033 aa4.72□□□□□ -1.65
CSDE1-210ENST00000525878 TRIP12Q14669 1992 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-210ENST00000525878 CYSRT1A8MQ03 144 aa4.71□□□□□ -1.66
CSDE1-210ENST00000525878 IFNA2P01563 188 aa4.71□□□□□ -1.66
CSDE1-210ENST00000525878 SLC3A2P08195 630 aaKnown RBP4.71□□□□□ -1.66
CSDE1-210ENST00000525878 CHRNB1P11230 501 aa4.71□□□□□ -1.66
CSDE1-210ENST00000525878 AKR1A1P14550 325 aa4.71□□□□□ -1.66
CSDE1-210ENST00000525878 DRD1P21728 446 aa4.71□□□□□ -1.66
CSDE1-210ENST00000525878 HOXA11P31270 313 aaPredicted RBP4.71□□□□□ -1.66
CSDE1-210ENST00000525878 SLC5A2P31639 672 aa4.71□□□□□ -1.66
CSDE1-210ENST00000525878 LTBQ06643 244 aa4.71□□□□□ -1.66
CSDE1-210ENST00000525878 GPS1Q13098 491 aa4.71□□□□□ -1.66
CSDE1-210ENST00000525878 ELF2Q15723 593 aa4.71□□□□□ -1.66
CSDE1-210ENST00000525878 GLE1Q53GS7 698 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 320.3 ms