RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 NAT16Q8N8M0 369 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 HJURPQ8NCD3 748 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 C3orf20Q8ND61 904 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 UCMAQ8WVF2 138 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 AZIN2Q96A70 460 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 CHFRQ96EP1 664 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 TMA16Q96EY4 203 aaKnown RBP5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 PIWIL1Q96J94 861 aaKnown RBP5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 VCPIP1Q96JH7 1222 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 SLC2A11Q9BYW1 496 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 TTYH3Q9C0H2 523 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 HAUS4Q9H6D7 363 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 WDCPQ9H6R7 721 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 MRPL47Q9HD33 250 aaKnown RBP5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 PARVAQ9NVD7 372 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 SLC8A2Q9UPR5 921 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 MTF2Q9Y483 593 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 ARIH1Q9Y4X5 557 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 SCINQ9Y6U3 715 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 OBSL1O75147 1896 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 KCNU1A8MYU2 1149 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 PI15O43692 258 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 GREM1O60565 184 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 TSPAN3O60637 253 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 TBL1XO60907 577 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 MFAP3LO75121 409 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 RNF40O75150 1001 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 RTN2O75298 545 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 MOCS3O95396 460 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 PENKP01210 267 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 FTLP02792 175 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 KLKB1P03952 638 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 FYNP06241 537 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 GZMAP12544 262 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 SKILP12757 684 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 UNGP13051 313 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 PDGFRAP16234 1089 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 GPD1P21695 349 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 CASP14P31944 242 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 OPRD1P41143 372 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 TNFRSF4P43489 277 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 CXCL12P48061 93 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 SEC13P55735 322 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 OXCT1P55809 520 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 GSCP56915 257 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 MRPS21P82921 87 aaKnown RBP5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 ATP11AP98196 1134 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 CSTF1Q05048 431 aaKnown RBP5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 MTAPQ13126 283 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 EIF4HQ15056 248 aaKnown RBP5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 ANGPT1Q15389 498 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 C2CD6Q53TS8 623 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 ZC3H12AQ5D1E8 599 aaKnown RBP5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 EOGTQ5NDL2 527 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 MPP7Q5T2T1 576 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 LRRC31Q6UY01 552 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 Q6ZS52 159 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 MON1BQ7L1V2 547 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 ZNF571Q7Z3V5 609 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 TMC6Q7Z403 805 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 ANKS1BQ7Z6G8 1248 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 PHLDB2Q86SQ0 1253 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 MFN1Q8IWA4 741 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 ETFBKMTQ8IXQ9 262 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 FAM217AQ8IXS0 508 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 DRC7Q8IY82 874 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 MCOLN2Q8IZK6 566 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 LGI2Q8N0V4 545 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 PIAS4Q8N2W9 510 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 TERB1Q8NA31 727 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 OR8K1Q8NGG5 319 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 RPLP0P6Q8NHW5 317 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 KCNV2Q8TDN2 545 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 WFIKKN2Q8TEU8 576 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 ATOH1Q92858 354 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 WBP2Q969T9 261 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 ZNF653Q96CK0 615 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 SLC39A13Q96H72 371 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 FCRL2Q96LA5 508 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 MCEEQ96PE7 176 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 PPP1R9BQ96SB3 815 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 PCDHB18PQ96TA0 734 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 TBCBQ99426 244 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 NPY6RQ99463 290 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 NCAPGQ9BPX3 1015 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 FAM126AQ9BYI3 521 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 LUC7LQ9NQ29 371 aaKnown RBP5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 RBM12Q9NTZ6 932 aaKnown RBP5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 PLK2Q9NYY3 685 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 STIM2Q9P246 746 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 STOML2Q9UJZ1 356 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 FBXO4Q9UKT5 387 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 HELZP42694 1942 aaKnown RBP5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 GREB1Q4ZG55 1949 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 TICRRQ7Z2Z1 1910 aa5.6□□□□□ -1.51
HMGB1P40-201ENST00000525121 MYH10P35580 1976 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 A0A1B0GVM2 712 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 TCAF2A6NFQ2 919 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 SIGLEC16A6NMB1 481 aa5.59□□□□□ -1.51
HMGB1P40-201ENST00000525121 CHURC1-FNTBB4DL54 471 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms