RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 STARD13Q9Y3M8 1113 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 RAD54BQ9Y620 910 aa13.37□□□□□ -0.27
TRAPPC4-205ENST00000525079 SYNJ2BP-COX16A0A087WUM0 186 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 EPHB6O15197 1021 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 TBL1XO60907 577 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 GFPT2O94808 682 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 RETP07949 1114 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 HOXB2P14652 356 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 CYP11B1P15538 503 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 HOXD9P28356 352 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 GBP1P32455 592 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 SLC11A2P49281 568 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 CCDC6Q16204 474 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 PTPN20Q4JDL3 420 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 USP39Q53GS9 565 aaKnown RBP13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 DCAF6Q58WW2 860 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 ZC3H12AQ5D1E8 599 aaKnown RBP13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 NUGGCQ68CJ6 796 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 NADSYN1Q6IA69 706 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 SDE2Q6IQ49 451 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 TRMT11Q7Z4G4 463 aaKnown RBP13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 NOP9Q86U38 636 aaKnown RBP13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 DEFB106AQ8N104 65 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 FRMD1Q8N878 549 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 SORCS1Q8WY21 1168 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 MYEOVQ96EZ4 313 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 PCMTD1Q96MG8 357 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 SERPINB11Q96P15 392 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 NOX5Q96PH1 765 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 HSD3B7Q9H2F3 369 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 SYNCQ9H7C4 482 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 COX16Q9P0S2 106 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 STIM2Q9P246 746 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 LIMA1Q9UHB6 759 aaKnown RBP13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 STOML2Q9UJZ1 356 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 TLR6Q9Y2C9 796 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 SLC27A6Q9Y2P4 619 aa13.36□□□□□ -0.27
TRAPPC4-205ENST00000525079 RIF1Q5UIP0 2472 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 FAM186AA6NE01 2351 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 A0A1W2PQF6 199 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 F8VZ95 297 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 GFRA2O00451 464 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 LATS1O95835 1130 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 TRUB2O95900 331 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 ATP1A3P13637 1013 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 BCKDHBP21953 392 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 TGM1P22735 817 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 RING1Q06587 406 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 SYCP1Q15431 976 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 PLK5Q496M5 336 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 FAM133BQ5BKY9 247 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 EFHC1Q5JVL4 640 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 PIK3R6Q5UE93 754 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 TMEM215Q68D42 235 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 KIAA1211LQ6NV74 962 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 BEND5Q7L4P6 421 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 ANKS1BQ7Z6G8 1248 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 TMEM35BQ8NCS4 154 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 ANKRD20A12PQ8NF67 263 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 DDX1Q92499 740 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 SLC39A13Q96H72 371 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 TRIM62Q9BVG3 475 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 CIPCQ9C0C6 399 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 DUSP15Q9H1R2 295 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 ARRDC1-AS1Q9H2J1 176 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 XPO7Q9UIA9 1087 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 SIK3Q9Y2K2 1263 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 CEP83Q9Y592 693 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 STON1Q9Y6Q2 735 aa13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 MYO18AQ92614 2054 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-205ENST00000525079 PTPRZ1P23471 2315 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 OTOGLQ3ZCN5 2332 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 GPR179Q6PRD1 2367 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 LGALS16A8MUM7 142 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 IRAK2O43187 625 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 MMEP08473 750 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 ZNF18P17022 549 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 GABRG2P18507 467 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 HLA-FP30511 346 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 RNASE9P60153 205 aaKnown RBP13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 CDK17Q00537 523 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 SLC6A3Q01959 620 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 UBXN1Q04323 297 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 C2CD6Q53TS8 623 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 OLFML1Q6UWY5 402 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 CFAP52Q8N1V2 620 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 WFDC5Q8TCV5 224 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 IPO4Q8TEX9 1081 aaKnown RBP13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 SLC20A1Q8WUM9 679 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 AZIN2Q96A70 460 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 ZC3H10Q96K80 434 aaKnown RBP13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 SLC2A13Q96QE2 648 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 SLC2A11Q9BYW1 496 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 NUCKS1Q9H1E3 243 aaKnown RBP13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 SLC6A17Q9H1V8 727 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 FAM204AQ9H8W3 233 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 SEMA4GQ9NTN9 838 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 ABCB8Q9NUT2 735 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 ELOVL2Q9NXB9 296 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms