RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 SLC2A11Q9BYW1 496 aa19.33■□□□□ 0.68
CAPN1-203ENST00000525013 CIPCQ9C0C6 399 aa19.33■□□□□ 0.68
CAPN1-203ENST00000525013 NDST4Q9H3R1 872 aa19.33■□□□□ 0.68
CAPN1-203ENST00000525013 CALCOCO1Q9P1Z2 691 aa19.33■□□□□ 0.68
CAPN1-203ENST00000525013 DNAH14Q0VDD8 3507 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 GFRA2O00451 464 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 CAPN9O14815 690 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 SLC30A4O14863 429 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 LATS1O95835 1130 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 RPL34P49207 117 aaKnown RBP19.32■□□□□ 0.68
CAPN1-203ENST00000525013 ZNF445P59923 1031 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 MEA1Q16626 185 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 VWA3BQ502W6 1294 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 NUGGCQ68CJ6 796 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 TCEAL6Q6IPX3 200 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 ARMCX6Q7L4S7 300 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 CYP2U1Q7Z449 544 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 TMEFF1Q8IYR6 380 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 DQX1Q8TE96 717 aaKnown RBP19.32■□□□□ 0.68
CAPN1-203ENST00000525013 TCEAL3Q969E4 200 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 GBP4Q96PP9 640 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 SLC4A5Q9BY07 1137 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 ELOVL2Q9NXB9 296 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 MBD1Q9UIS9 605 aaPredicted RBP19.32■□□□□ 0.68
CAPN1-203ENST00000525013 DNAJC12Q9UKB3 198 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 NAALADL1Q9UQQ1 740 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 STON1Q9Y6Q2 735 aa19.32■□□□□ 0.68
CAPN1-203ENST00000525013 E5RJQ4 531 aa19.31■□□□□ 0.68
CAPN1-203ENST00000525013 IGLV3-27P01718 113 aa19.31■□□□□ 0.68
CAPN1-203ENST00000525013 FYNP06241 537 aa19.31■□□□□ 0.68
CAPN1-203ENST00000525013 NDUFV2P19404 249 aa19.31■□□□□ 0.68
CAPN1-203ENST00000525013 HOXD9P28356 352 aaPredicted RBP19.31■□□□□ 0.68
CAPN1-203ENST00000525013 ARID5AQ03989 594 aa19.31■□□□□ 0.68
CAPN1-203ENST00000525013 PTK2Q05397 1052 aa19.31■□□□□ 0.68
CAPN1-203ENST00000525013 RING1Q06587 406 aa19.31■□□□□ 0.68
CAPN1-203ENST00000525013 STARD3Q14849 445 aa19.31■□□□□ 0.68
CAPN1-203ENST00000525013 RFWD3Q6PCD5 774 aa19.31■□□□□ 0.68
CAPN1-203ENST00000525013 ADAM32Q8TC27 787 aa19.31■□□□□ 0.68
CAPN1-203ENST00000525013 PIGKQ92643 395 aa19.31■□□□□ 0.68
CAPN1-203ENST00000525013 TRIM62Q9BVG3 475 aa19.31■□□□□ 0.68
CAPN1-203ENST00000525013 SIX2Q9NPC8 291 aa19.31■□□□□ 0.68
CAPN1-203ENST00000525013 RXFP3Q9NSD7 469 aa19.31■□□□□ 0.68
CAPN1-203ENST00000525013 THAP10Q9P2Z0 257 aaPredicted RBP19.31■□□□□ 0.68
CAPN1-203ENST00000525013 CYTH4Q9UIA0 394 aa19.31■□□□□ 0.68
CAPN1-203ENST00000525013 STOML2Q9UJZ1 356 aa19.31■□□□□ 0.68
CAPN1-203ENST00000525013 AJAP1Q9UKB5 411 aaPredicted RBP19.31■□□□□ 0.68
CAPN1-203ENST00000525013 GOLGA6L7A0A1B0GV03 622 aa19.3■□□□□ 0.68
CAPN1-203ENST00000525013 MED19A0JLT2 244 aaPredicted RBP19.3■□□□□ 0.68
CAPN1-203ENST00000525013 KCNJ18B7U540 433 aa19.3■□□□□ 0.68
CAPN1-203ENST00000525013 NPC1O15118 1278 aa19.3■□□□□ 0.68
CAPN1-203ENST00000525013 PAPSS1O43252 624 aaPredicted RBP19.3■□□□□ 0.68
CAPN1-203ENST00000525013 ACSL4O60488 711 aa19.3■□□□□ 0.68
CAPN1-203ENST00000525013 PDCLQ13371 301 aa19.3■□□□□ 0.68
CAPN1-203ENST00000525013 KCNJ12Q14500 433 aa19.3■□□□□ 0.68
CAPN1-203ENST00000525013 EIF4HQ15056 248 aaKnown RBP19.3■□□□□ 0.68
CAPN1-203ENST00000525013 E2F5Q15329 346 aa19.3■□□□□ 0.68
CAPN1-203ENST00000525013 IL31Q6EBC2 164 aa19.3■□□□□ 0.68
CAPN1-203ENST00000525013 KIAA1324Q6UXG2 1013 aaKnown RBP19.3■□□□□ 0.68
CAPN1-203ENST00000525013 TMEM110Q86TL2 294 aa19.3■□□□□ 0.68
CAPN1-203ENST00000525013 PASD1Q8IV76 773 aa19.3■□□□□ 0.68
CAPN1-203ENST00000525013 SORCS1Q8WY21 1168 aa19.3■□□□□ 0.68
CAPN1-203ENST00000525013 SERPINB11Q96P15 392 aa19.3■□□□□ 0.68
CAPN1-203ENST00000525013 SLC6A17Q9H1V8 727 aa19.3■□□□□ 0.68
CAPN1-203ENST00000525013 SAMSN1Q9NSI8 373 aaKnown RBP19.3■□□□□ 0.68
CAPN1-203ENST00000525013 FOXN3O00409 490 aaPredicted RBP19.29■□□□□ 0.68
CAPN1-203ENST00000525013 TIMM44O43615 452 aa19.29■□□□□ 0.68
CAPN1-203ENST00000525013 SYNCRIPO60506 623 aaKnown RBP19.29■□□□□ 0.68
CAPN1-203ENST00000525013 TBL1XO60907 577 aa19.29■□□□□ 0.68
CAPN1-203ENST00000525013 IL12RB1P42701 662 aa19.29■□□□□ 0.68
CAPN1-203ENST00000525013 SGSHP51688 502 aa19.29■□□□□ 0.68
CAPN1-203ENST00000525013 YWHAZP63104 245 aaKnown RBP19.29■□□□□ 0.68
CAPN1-203ENST00000525013 RPL6Q02878 288 aaKnown RBP19.29■□□□□ 0.68
CAPN1-203ENST00000525013 ZNF234Q14588 700 aa19.29■□□□□ 0.68
CAPN1-203ENST00000525013 MIIPQ5JXC2 388 aa19.29■□□□□ 0.68
CAPN1-203ENST00000525013 STPG1Q5TH74 334 aa19.29■□□□□ 0.68
CAPN1-203ENST00000525013 SYPL2Q5VXT5 272 aa19.29■□□□□ 0.68
CAPN1-203ENST00000525013 DEFB119Q8N690 84 aa19.29■□□□□ 0.68
CAPN1-203ENST00000525013 MRGPRX1Q96LB2 322 aa19.29■□□□□ 0.68
CAPN1-203ENST00000525013 NOX5Q96PH1 765 aa19.29■□□□□ 0.68
CAPN1-203ENST00000525013 DDX50Q9BQ39 737 aaKnown RBP19.29■□□□□ 0.68
CAPN1-203ENST00000525013 CD248Q9HCU0 757 aa19.29■□□□□ 0.68
CAPN1-203ENST00000525013 ABCB8Q9NUT2 735 aa19.29■□□□□ 0.68
CAPN1-203ENST00000525013 STIM2Q9P246 746 aa19.29■□□□□ 0.68
CAPN1-203ENST00000525013 CYP8B1Q9UNU6 501 aa19.29■□□□□ 0.68
CAPN1-203ENST00000525013 TLR6Q9Y2C9 796 aa19.29■□□□□ 0.68
CAPN1-203ENST00000525013 CKAP5Q14008 2032 aa19.29■□□□□ 0.68
CAPN1-203ENST00000525013 TNRC6BQ9UPQ9 1833 aaKnown RBP19.28■□□□□ 0.68
CAPN1-203ENST00000525013 KHNYNO15037 678 aaKnown RBP19.28■□□□□ 0.68
CAPN1-203ENST00000525013 ZNF217O75362 1048 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 MOCS2O96007 188 aaPredicted RBP19.28■□□□□ 0.68
CAPN1-203ENST00000525013 PNMA6AP0CW24 399 aaPredicted RBP19.28■□□□□ 0.68
CAPN1-203ENST00000525013 KCNA4P22459 653 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 HLA-FP30511 346 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 SLC6A4P31645 630 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 KRT9P35527 623 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 PTGER3P43115 390 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 RAPGEF1Q13905 1077 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 FUT11Q495W5 492 aa19.28■□□□□ 0.68
CAPN1-203ENST00000525013 FAM133BQ5BKY9 247 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms