RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 RAB21Q9UL25 225 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 MAFFQ9ULX9 164 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 SLC12A4Q9UP95 1085 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 ZBTB1Q9Y2K1 713 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 INSL6Q9Y581 213 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 HEMK1Q9Y5R4 338 aaPredicted RBP4.42□□□□□ -1.7
SKP1-212ENST00000523966 WNT6Q9Y6F9 365 aa4.42□□□□□ -1.7
SKP1-212ENST00000523966 GXYLT2A0PJZ3 443 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 BTBD19C9JJ37 291 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 FYB1O15117 783 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 NKX2-8O15522 239 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 TFRCP02786 760 aaKnown RBP4.41□□□□□ -1.7
SKP1-212ENST00000523966 ALDOAP04075 364 aaKnown RBP4.41□□□□□ -1.7
SKP1-212ENST00000523966 TK1P04183 234 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 PAX3P23760 479 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 SLC8A1P32418 973 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 TGFB2P61812 414 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 CYP4F2P78329 520 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 POU5F1BQ06416 359 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 SLC12A1Q13621 1099 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 KCNB1Q14721 858 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 MFSD13AQ14CX5 517 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 ANKRD1Q15327 319 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 PFKFB3Q16875 520 aaPredicted RBP4.41□□□□□ -1.7
SKP1-212ENST00000523966 GALNTL6Q49A17 601 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 CERKLQ49MI3 558 aaPredicted RBP4.41□□□□□ -1.7
SKP1-212ENST00000523966 TTC22Q5TAA0 569 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 DGAT2L7PQ6IED9 249 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 MMS22LQ6ZRQ5 1243 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 DCDC5Q6ZRR9 648 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 SYT13Q7L8C5 426 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 SUGP1Q8IWZ8 645 aaKnown RBP4.41□□□□□ -1.7
SKP1-212ENST00000523966 ADPRHL1Q8NDY3 354 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 CEP70Q8NHQ1 597 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 GLMPQ8WWB7 406 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 AKAP1Q92667 903 aaKnown RBP eCLIP4.41□□□□□ -1.7
SKP1-212ENST00000523966 USP13Q92995 863 aaPredicted RBP4.41□□□□□ -1.7
SKP1-212ENST00000523966 MCRS1Q96EZ8 462 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 EDC3Q96F86 508 aaKnown RBP4.41□□□□□ -1.7
SKP1-212ENST00000523966 PRR11Q96HE9 360 aaPredicted RBP4.41□□□□□ -1.7
SKP1-212ENST00000523966 TBATAQ96M53 351 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 COG8Q96MW5 612 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 PIGSQ96S52 555 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 TIMP4Q99727 224 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 THAP7Q9BT49 309 aaPredicted RBP4.41□□□□□ -1.7
SKP1-212ENST00000523966 MECRQ9BV79 373 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 PRDM16Q9HAZ2 1276 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 RIC8AQ9NPQ8 531 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 ABHD10Q9NUJ1 306 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 ASB6Q9NWX5 421 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 C9orf78Q9NZ63 289 aaPredicted RBP4.41□□□□□ -1.7
SKP1-212ENST00000523966 KCND3Q9UK17 655 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 FEM1BQ9UK73 627 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 TRPC5Q9UL62 973 aaPredicted RBP4.41□□□□□ -1.7
SKP1-212ENST00000523966 FZD4Q9ULV1 537 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 DERAQ9Y315 318 aa4.41□□□□□ -1.7
SKP1-212ENST00000523966 LRRFIP2Q9Y608 721 aaKnown RBP4.41□□□□□ -1.7
SKP1-212ENST00000523966 LOC105369274A0A096LPK9 316 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 LOC102723532A0A0G2JNH3 316 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 RRN3P2A6NIE6 340 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 MBD3L5A6NJ08 208 aaPredicted RBP4.4□□□□□ -1.71
SKP1-212ENST00000523966 C3orf70A6NLC5 250 aaPredicted RBP4.4□□□□□ -1.71
SKP1-212ENST00000523966 SLC38A8A6NNN8 435 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 CLIC1O00299 241 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 CYR61O00622 381 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 HNRNPRO43390 633 aaKnown RBP4.4□□□□□ -1.71
SKP1-212ENST00000523966 SH3BP5O60239 455 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 PRAMEF2O60811 474 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 XBP1P17861 261 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 RPL15P61313 204 aaKnown RBP4.4□□□□□ -1.71
SKP1-212ENST00000523966 WDR5P61964 334 aaKnown RBP4.4□□□□□ -1.71
SKP1-212ENST00000523966 RAE1P78406 368 aaKnown RBP4.4□□□□□ -1.71
SKP1-212ENST00000523966 TLE3Q04726 772 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 DPTQ07507 201 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 EFR3AQ14156 821 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 GPR162Q16538 588 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 GLE1Q53GS7 698 aaKnown RBP4.4□□□□□ -1.71
SKP1-212ENST00000523966 RNASE12Q5GAN4 147 aaKnown RBP4.4□□□□□ -1.71
SKP1-212ENST00000523966 STRIP1Q5VSL9 837 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 TMEM88Q6PEY1 159 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 SYNE3Q6ZMZ3 975 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 ARHGEF25Q86VW2 580 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 OR4N4Q8N0Y3 316 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 ANKRD44Q8N8A2 993 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 NPIPB3Q92617 1050 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 HIC2Q96JB3 615 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 RNF26Q9BY78 433 aaPredicted RBP4.4□□□□□ -1.71
SKP1-212ENST00000523966 CDCP1Q9H5V8 836 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 ALG13Q9NP73 1137 aaKnown RBP4.4□□□□□ -1.71
SKP1-212ENST00000523966 ARL8BQ9NVJ2 186 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 SUFUQ9UMX1 484 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 PCDHA10Q9Y5I2 948 aa4.4□□□□□ -1.71
SKP1-212ENST00000523966 TARM1B6A8C7 271 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 B9A039 149 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 H7C1Q1 480 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 SMIM22K7EJ46 135 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 M0QYT0 321 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 NCAM2O15394 837 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 RNF8O76064 485 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 PYGLP06737 847 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms