RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	PPM1E	Q8WY54	764 aa		5.19	□□□□□ -1.58
CTNNA1-238	ENST00000523298	THAP4	Q8WY91	577 aa		5.19	□□□□□ -1.58
CTNNA1-238	ENST00000523298	TBC1D5	Q92609	795 aa		5.19	□□□□□ -1.58
CTNNA1-238	ENST00000523298	RUBCN	Q92622	972 aa		5.19	□□□□□ -1.58
CTNNA1-238	ENST00000523298	VPS50	Q96JG6	964 aa		5.19	□□□□□ -1.58
CTNNA1-238	ENST00000523298	TIMP4	Q99727	224 aa		5.19	□□□□□ -1.58
CTNNA1-238	ENST00000523298	RMI1	Q9H9A7	625 aa		5.19	□□□□□ -1.58
CTNNA1-238	ENST00000523298	C9orf78	Q9NZ63	289 aa	Predicted RBP	5.19	□□□□□ -1.58
CTNNA1-238	ENST00000523298		E7EVH7	732 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	PRY	O14603	147 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	SFPQ	P23246	707 aa	Known RBP eCLIP	5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	CNTF	P26441	200 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	SERPINA4	P29622	427 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	PROK1	P58294	105 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	TXNL4A	P83876	142 aa	Known RBP	5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	CFHR3	Q02985	330 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	TFF2	Q03403	129 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	DPT	Q07507	201 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	CCDC15	Q0P6D6	951 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	SEC23B	Q15437	767 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	FAM110C	Q1W6H9	321 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	FBXO47	Q5MNV8	452 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	SMAP1	Q8IYB5	467 aa	Predicted RBP	5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	SLC9A6	Q92581	669 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	UROC1	Q96N76	676 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	GATA5	Q9BWX5	397 aa	Predicted RBP	5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	BRD8	Q9H0E9	1235 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	MLXIPL	Q9NP71	852 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	SAYSD1	Q9NPB0	183 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	FBXO28	Q9NVF7	368 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	SH3BP4	Q9P0V3	963 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	ARPP21	Q9UBL0	812 aa	Predicted RBP	5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	TLK1	Q9UKI8	766 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	PCDHA10	Q9Y5I2	948 aa		5.18	□□□□□ -1.58
CTNNA1-238	ENST00000523298	TARM1	B6A8C7	271 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	GCOM1	H8Y6P7	765 aa	Predicted RBP	5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	EYA2	O00167	538 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	CLIC1	O00299	241 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	NCAM2	O15394	837 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	AKAP8	O43823	692 aa	Known RBP	5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	AGR2	O95994	175 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	MT-CO3	P00414	261 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	TK1	P04183	234 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	POLB	P06746	335 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	LYL1	P12980	280 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	HSD3B1	P14060	373 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	WT1	P19544	449 aa	Predicted RBP	5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	RXRA	P19793	462 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	MAPK9	P45984	424 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	AGTR2	P50052	363 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	CCR5	P51681	352 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	JAK3	P52333	1124 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	POLE2	P56282	527 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	TAS2R50	P59544	299 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	SLC14A1	Q13336	389 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	DCTN1	Q14203	1278 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	MFSD13A	Q14CX5	517 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	TBC1D25	Q3MII6	688 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	MTHFD1L	Q6UB35	978 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	SYNE3	Q6ZMZ3	975 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	SLC29A4	Q7RTT9	530 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	TFAP2D	Q7Z6R9	452 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	ARHGEF25	Q86VW2	580 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	EXD3	Q8N9H8	876 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	FAM71D	Q8N9W8	422 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	OR52L2P	Q8NGH6	319 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	OR6Y1	Q8NGX8	325 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	GLMP	Q8WWB7	406 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	HERVK_113	Q902F9	699 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	REXO5	Q96IC2	774 aa	Known RBP	5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	RITA1	Q96K30	269 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	EIF3C	Q99613	913 aa	Known RBP	5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	EIF2AK1	Q9BQI3	630 aa	Known RBP	5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	R3HDML	Q9H3Y0	253 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	CHODL	Q9H9P2	273 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	TLR8	Q9NR97	1041 aa	Known RBP	5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	SNX15	Q9NRS6	342 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	SEMA4G	Q9NTN9	838 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	GAR1	Q9NY12	217 aa	Known RBP	5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	SLC12A4	Q9UP95	1085 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	B3GNT3	Q9Y2A9	372 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	UBE2J1	Q9Y385	318 aa	Predicted RBP	5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	AOX1	Q06278	1338 aa		5.17	□□□□□ -1.58
CTNNA1-238	ENST00000523298	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	5.16	□□□□□ -1.58
CTNNA1-238	ENST00000523298		H3BNC9	293 aa		5.16	□□□□□ -1.58
CTNNA1-238	ENST00000523298	IRAK2	O43187	625 aa		5.16	□□□□□ -1.58
CTNNA1-238	ENST00000523298	C1R	P00736	705 aa		5.16	□□□□□ -1.58
CTNNA1-238	ENST00000523298	CSF1	P09603	554 aa		5.16	□□□□□ -1.58
CTNNA1-238	ENST00000523298	ZNF37A	P17032	561 aa	Predicted RBP	5.16	□□□□□ -1.58
CTNNA1-238	ENST00000523298	NDUFS1	P28331	727 aa		5.16	□□□□□ -1.58
CTNNA1-238	ENST00000523298	IDUA	P35475	653 aa		5.16	□□□□□ -1.58
CTNNA1-238	ENST00000523298	STAT6	P42226	847 aa		5.16	□□□□□ -1.58
CTNNA1-238	ENST00000523298	CDK7	P50613	346 aa		5.16	□□□□□ -1.58
CTNNA1-238	ENST00000523298	WDR5	P61964	334 aa	Known RBP	5.16	□□□□□ -1.58
CTNNA1-238	ENST00000523298	RNASEL	Q05823	741 aa	Known RBP	5.16	□□□□□ -1.58
CTNNA1-238	ENST00000523298	RPS6KA2	Q15349	733 aa		5.16	□□□□□ -1.58
CTNNA1-238	ENST00000523298	ZNF484	Q5JVG2	852 aa		5.16	□□□□□ -1.58
CTNNA1-238	ENST00000523298	DGAT2L7P	Q6IED9	249 aa		5.16	□□□□□ -1.58
CTNNA1-238	ENST00000523298	TRIM72	Q6ZMU5	477 aa		5.16	□□□□□ -1.58
CTNNA1-238	ENST00000523298	DBX2	Q6ZNG2	339 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms