RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 AGAP1Q9UPQ3 857 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 LIPT1Q9Y234 373 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 RCE1Q9Y256 329 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 PTRH2Q9Y3E5 179 aaKnown RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 NEU2Q9Y3R4 380 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 SPAG9O60271 1321 aaKnown RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 IGSF1Q8N6C5 1336 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 FAM95CA0A1B0GW59 222 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 A0A1W2PRV1 198 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 FAM90A7PA6NKC0 464 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 SH2D7A6NKC9 451 aaPredicted RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 ZNF785A8K8V0 405 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 FAM90A22PA8MWA6 464 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 FAM90A12PA8MX19 464 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 FAM90A23PA8MXZ1 464 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 BTBD18B2RXH4 712 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 AKR1B15C9JRZ8 316 aaPredicted RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 M0QYG6 137 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 DNM1LO00429 736 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 CTDSP2O14595 271 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 ZSCAN9O15535 394 aaPredicted RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 HNRNPCL1O60812 293 aaKnown RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 BCAS2O75934 225 aaPredicted RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 LARGE1O95461 756 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 GLI4P10075 376 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 GAAP10253 952 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 CDH2P19022 906 aaPredicted RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 DEKP35659 375 aaKnown RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 GPD2P43304 727 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 ALDH1A3P47895 512 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 CPA2P48052 419 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 PIP4K2AP48426 406 aaPredicted RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 LIG4P49917 911 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 NPY4RP50391 375 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 MRPL12P52815 198 aaKnown RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 YBX1P67809 324 aaKnown RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 MVKQ03426 396 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 COX10Q12887 443 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 TMED1Q13445 227 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 ITGA7Q13683 1181 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 OASLQ15646 514 aaKnown RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 INSCQ1MX18 579 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 ZNF750Q32MQ0 723 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 MAJINQ3KP22 176 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 NHSL2Q5HYW2 709 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 CRB2Q5IJ48 1285 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 DENND1BQ6P3S1 775 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 C16orf87Q6PH81 154 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 OLFM4Q6UX06 510 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 ZNF574Q6ZN55 896 aaPredicted RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 SEM1Q6ZVN7 128 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 TRABD2AQ86V40 505 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 UNC5BQ8IZJ1 945 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 SHC3Q92529 594 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 CNDP1Q96KN2 507 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 HSPA12BQ96MM6 686 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 WDFY2Q96P53 400 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 PRAM1Q96QH2 718 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 FIZ1Q96SL8 496 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 G6PC3Q9BUM1 346 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 SPATA5L1Q9BVQ7 753 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 BTBD2Q9BX70 525 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 TINAGL1Q9GZM7 467 aaPredicted RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 REXO4Q9GZR2 422 aaKnown RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 PCED1AQ9H1Q7 454 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 SLC32A1Q9H598 525 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 TASP1Q9H6P5 420 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 SH2D4AQ9H788 454 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 DNAJC18Q9H819 358 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 MRPL44Q9H9J2 332 aaKnown RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 TLR8Q9NR97 1041 aaKnown RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 PAPOLBQ9NRJ5 636 aaKnown RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 TMLHEQ9NVH6 421 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 GPRC5DQ9NZD1 345 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 NINJ2Q9NZG7 142 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 DNMT3BQ9UBC3 853 aaKnown RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 CPSF3Q9UKF6 684 aaKnown RBP4.26□□□□□ -1.73
SKP1-209ENST00000522552 BAG5Q9UL15 447 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 FAM184BQ9ULE4 1060 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 ADAM18Q9Y3Q7 739 aa4.26□□□□□ -1.73
SKP1-209ENST00000522552 ADGRF5Q8IZF2 1346 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 A0A1W2PQM1 296 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 LRRD1A4D1F6 860 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 SLC38A8A6NNN8 435 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 ZNF839A8K0R7 811 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 GCOM1H8Y6P7 765 aaPredicted RBP4.25□□□□□ -1.73
SKP1-209ENST00000522552 ZNF263O14978 683 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 KLHL41O60662 606 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 DIAPH2O60879 1101 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 SLC43A1O75387 559 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 ITGA10O75578 1167 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 HEXIM1O94992 359 aaKnown RBP4.25□□□□□ -1.73
SKP1-209ENST00000522552 PDHA1P08559 390 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 IL10P22301 178 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 MAP4P27816 1152 aaKnown RBP4.25□□□□□ -1.73
SKP1-209ENST00000522552 TNFRSF8P28908 595 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 CD6P30203 668 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 SLC6A4P31645 630 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 TTKP33981 857 aa4.25□□□□□ -1.73
SKP1-209ENST00000522552 CRHR1P34998 444 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms