RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 PREPLQ4J6C6 727 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 DSTYKQ6XUX3 929 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 USP51Q70EK9 711 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 Q8N1X5 172 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 ZNF276Q8N554 614 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 BEND2Q8NDZ0 799 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 TDRD7Q8NHU6 1098 aaKnown RBP3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 CACTINQ8WUQ7 758 aaKnown RBP3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 GOLGA1Q92805 767 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 FKBP10Q96AY3 582 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 EDC3Q96F86 508 aaKnown RBP3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 MASTLQ96GX5 879 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 RSRC1Q96IZ7 334 aaKnown RBP3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 SCAND2PQ9GZW5 306 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 CCDC134Q9H6E4 229 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 GLOD4Q9HC38 313 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 SERTAD4Q9NUC0 356 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 SYBUQ9NX95 663 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 KCTD5Q9NXV2 234 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 GAR1Q9NY12 217 aaKnown RBP3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 DLL3Q9NYJ7 618 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 CLIC5Q9NZA1 410 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 SLC25A10Q9UBX3 287 aaPredicted RBP3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 CD207Q9UJ71 328 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 RAB21Q9UL25 225 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 FZD1Q9UP38 647 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 CNPY2Q9Y2B0 182 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 RRP7AQ9Y3A4 280 aaKnown RBP3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 NOX1Q9Y5S8 564 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 COL4A3Q01955 1670 aa3.87□□□□□ -1.79
HMGN1P28-201ENST00000521340 RUSC2Q8N2Y8 1516 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 PGPEP1LA6NFU8 196 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 UNC119BA6NIH7 251 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 TSPAN3O60637 253 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 PEX11BO96011 259 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 F9P00740 461 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 ARSAP15289 507 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 GSTM5P46439 218 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 DIO1P49895 249 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 GPC5P78333 572 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 E2F1Q01094 437 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 TLE3Q04726 772 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 GALNT2Q10471 571 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 PTP4A2Q12974 167 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 EIF2B5Q13144 721 aaKnown RBP3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 CRHR2Q13324 411 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 GAB1Q13480 694 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 SEMA3AQ14563 771 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 KCTD2Q14681 263 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 RPS6KA2Q15349 733 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 SPDYE7PQ495Y7 208 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 UBAP2Q5T6F2 1119 aaKnown RBP3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 ZNF618Q5T7W0 954 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 FNDC7Q5VTL7 733 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 SPATA1Q5VX52 437 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 DENND1BQ6P3S1 775 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 INO80CQ6PI98 192 aaPredicted RBP3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 RINLQ6ZS11 566 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 Q6ZWC4 215 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 MRGPREQ86SM8 312 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 RAB11FIP4Q86YS3 637 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 SYNE4Q8N205 404 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 PNPLA1Q8N8W4 532 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 CHST13Q8NET6 341 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 ZMIZ2Q8NF64 920 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 ADAMTS15Q8TE58 950 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 RNF125Q96EQ8 232 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 PTCD3Q96EY7 689 aaKnown RBP3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 REXO5Q96IC2 774 aaKnown RBP3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 PGBD1Q96JS3 809 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 SNX18Q96RF0 628 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 TREX2Q9BQ50 279 aaPredicted RBP3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 LBHD1Q9BQE6 289 aaPredicted RBP3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 ELOVL1Q9BW60 279 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 TAOK3Q9H2K8 898 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 CDCP1Q9H5V8 836 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 SEMA4BQ9NPR2 832 aaPredicted RBP3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 TMLHEQ9NVH6 421 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 MTMR4Q9NYA4 1195 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 HDAC6Q9UBN7 1215 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 AASSQ9UDR5 926 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 TRPC5Q9UL62 973 aaPredicted RBP3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 TBX20Q9UMR3 447 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 SLC12A4Q9UP95 1085 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 KDM3AQ9Y4C1 1321 aa3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 TDRD9Q8NDG6 1382 aaKnown RBP3.86□□□□□ -1.79
HMGN1P28-201ENST00000521340 A0A1W2PQM1 296 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 C16orf96A6NNT2 1141 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 MPPED1O15442 326 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 TGFB1I1O43294 461 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 ONECUT2O95948 504 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 C1SP09871 688 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 LYL1P12980 280 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 CREB1P16220 341 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 LAG3P18627 525 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 ADRA1DP25100 572 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 KRT9P35527 623 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 PSMC2P35998 433 aaKnown RBP3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 RGS2P41220 211 aa3.85□□□□□ -1.79
HMGN1P28-201ENST00000521340 PNPLA4P41247 253 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms