RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 UGT1A9O60656 530 aa11.72□□□□□ -0.53
CLK4-206ENST00000520878 KCNE1P15382 129 aa11.72□□□□□ -0.53
CLK4-206ENST00000520878 FOXN2P32314 431 aa11.72□□□□□ -0.53
CLK4-206ENST00000520878 SLC10A2Q12908 348 aaPredicted RBP11.72□□□□□ -0.53
CLK4-206ENST00000520878 SEPT6Q14141 434 aa11.72□□□□□ -0.53
CLK4-206ENST00000520878 SPOUT1Q5T280 376 aaKnown RBP11.72□□□□□ -0.53
CLK4-206ENST00000520878 SLC26A11Q86WA9 606 aa11.72□□□□□ -0.53
CLK4-206ENST00000520878 MIB1Q86YT6 1006 aa11.72□□□□□ -0.53
CLK4-206ENST00000520878 TP53INP2Q8IXH6 220 aa11.72□□□□□ -0.53
CLK4-206ENST00000520878 SCAMP5Q8TAC9 235 aa11.72□□□□□ -0.53
CLK4-206ENST00000520878 STK32AQ8WU08 396 aa11.72□□□□□ -0.53
CLK4-206ENST00000520878 ZNF669Q96BR6 464 aaPredicted RBP11.72□□□□□ -0.53
CLK4-206ENST00000520878 P2RY11Q96G91 374 aa11.72□□□□□ -0.53
CLK4-206ENST00000520878 UGT1A7Q9HAW7 530 aa11.72□□□□□ -0.53
CLK4-206ENST00000520878 UGT1A10Q9HAW8 530 aa11.72□□□□□ -0.53
CLK4-206ENST00000520878 UGT1A8Q9HAW9 530 aa11.72□□□□□ -0.53
CLK4-206ENST00000520878 CRTAC1Q9NQ79 661 aa11.72□□□□□ -0.53
CLK4-206ENST00000520878 ARHGEF4Q9NR80 690 aa11.72□□□□□ -0.53
CLK4-206ENST00000520878 PIGVQ9NUD9 493 aa11.72□□□□□ -0.53
CLK4-206ENST00000520878 OR12D3Q9UGF7 316 aa11.72□□□□□ -0.53
CLK4-206ENST00000520878 MDM4O15151 490 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 KPNA6O60684 536 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 F7P08709 466 aaPredicted RBP11.71□□□□□ -0.53
CLK4-206ENST00000520878 CPB1P15086 417 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 BGNP21810 368 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 PTPN7P35236 360 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 OLIG2Q13516 323 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 TRMT10BQ6PF06 316 aaKnown RBP11.71□□□□□ -0.53
CLK4-206ENST00000520878 RAPH1Q70E73 1250 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 NUDCD3Q8IVD9 361 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 UNC5BQ8IZJ1 945 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 TEKT4Q8WW24 435 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 SMARCD1Q96GM5 515 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 SLC40A1Q9NP59 571 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 SFMBT1Q9UHJ3 866 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.71□□□□□ -0.53
CLK4-206ENST00000520878 CHADO15335 359 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 GABBR2O75899 941 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 CHRNA1P02708 482 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 IL4RP24394 825 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 TYK2P29597 1187 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 PTPN9P43378 593 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 YWHAHQ04917 246 aaPredicted RBP11.71□□□□□ -0.53
CLK4-206ENST00000520878 ITGA7Q13683 1181 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 RCN2Q14257 317 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 MPP5Q8N3R9 675 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 TSNARE1Q96NA8 513 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 MANSC1Q9H8J5 431 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 GDAP2Q9NXN4 497 aa11.71□□□□□ -0.53
CLK4-206ENST00000520878 SMAPO00193 183 aa11.71□□□□□ -0.54
CLK4-206ENST00000520878 AOC2O75106 756 aa11.71□□□□□ -0.54
CLK4-206ENST00000520878 STAU1O95793 577 aaKnown RBP11.71□□□□□ -0.54
CLK4-206ENST00000520878 ADRA1BP35368 520 aa11.71□□□□□ -0.54
CLK4-206ENST00000520878 SLC39A12Q504Y0 691 aa11.71□□□□□ -0.54
CLK4-206ENST00000520878 EMC10Q5UCC4 262 aa11.71□□□□□ -0.54
CLK4-206ENST00000520878 TTC39BQ5VTQ0 682 aaPredicted RBP11.71□□□□□ -0.54
CLK4-206ENST00000520878 RFX8Q6ZV50 586 aa11.71□□□□□ -0.54
CLK4-206ENST00000520878 PLCD4Q9BRC7 762 aa11.71□□□□□ -0.54
CLK4-206ENST00000520878 TSSK1BQ9BXA7 367 aa11.71□□□□□ -0.54
CLK4-206ENST00000520878 TRIM55Q9BYV6 548 aa11.71□□□□□ -0.54
CLK4-206ENST00000520878 TRPV6Q9H1D0 765 aa11.71□□□□□ -0.54
CLK4-206ENST00000520878 ATXN3LQ9H3M9 355 aa11.71□□□□□ -0.54
CLK4-206ENST00000520878 USP29Q9HBJ7 922 aa11.71□□□□□ -0.54
CLK4-206ENST00000520878 SLC17A6Q9P2U8 582 aa11.71□□□□□ -0.54
CLK4-206ENST00000520878 DNAH12Q6ZR08 3092 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 F8W810 466 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 SEPT4O43236 478 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 MSI1O43347 362 aaKnown RBP11.7□□□□□ -0.54
CLK4-206ENST00000520878 TAC1P20366 129 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 NR2C2P49116 596 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 ERFP50548 548 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 PRPSAP1Q14558 356 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 AGMOQ6ZNB7 445 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 STRADAQ7RTN6 431 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 C3orf58Q8NDZ4 430 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 TRPV1Q8NER1 839 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 AGR3Q8TD06 166 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 ZNF75CPQ92670 426 aaPredicted RBP11.7□□□□□ -0.54
CLK4-206ENST00000520878 KLC4Q9NSK0 619 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 FARP1Q9Y4F1 1045 aaPredicted RBP11.7□□□□□ -0.54
CLK4-206ENST00000520878 SCN1AP35498 2009 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 SDR42E2A6NKP2 422 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 PCSK7Q16549 785 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 SPRED3Q2MJR0 410 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 FAM117BQ6P1L5 589 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 GPRIN1Q7Z2K8 1008 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 RASSF3Q86WH2 238 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 IPMKQ8NFU5 416 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 OR52K1Q8NGK4 314 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 KHSRPQ92945 711 aaKnown RBP eCLIP11.7□□□□□ -0.543e-6■■■□□ 16.4
CLK4-206ENST00000520878 SEPT5Q99719 369 aaPredicted RBP11.7□□□□□ -0.54
CLK4-206ENST00000520878 XAB2Q9HCS7 855 aaKnown RBP11.7□□□□□ -0.54
CLK4-206ENST00000520878 A0A0A0MRY4 1105 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 NT5C1B-RDH14C9J2C7 533 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 CA12O43570 354 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 PMPCBO75439 489 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 ZWINTO95229 277 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 APOEP02649 317 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 ERVK-10P10266 1014 aa11.7□□□□□ -0.54
CLK4-206ENST00000520878 TARSP26639 723 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms