RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 ARHGEF4Q9NR80 690 aa22.85■■□□□ 1.25
VEGFA-217ENST00000518538 DNAJC17Q9NVM6 304 aaKnown RBP22.85■■□□□ 1.25
VEGFA-217ENST00000518538 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.85■■□□□ 1.252e-7■■■■□ 22.2
VEGFA-217ENST00000518538 DEC1Q9P2X7 70 aa22.85■■□□□ 1.25
VEGFA-217ENST00000518538 ARIH1Q9Y4X5 557 aaPredicted RBP22.85■■□□□ 1.25
VEGFA-217ENST00000518538 A0A0A0MRY4 1105 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 M0QYT0 321 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 KAT7O95251 611 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 APODP05090 189 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 CCR1P32246 355 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 GRIA2P42262 883 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 SULT1E1P49888 294 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 KDSRQ06136 332 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 MESP2Q0VG99 397 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 NME3Q13232 169 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 GAS6Q14393 721 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 SLC25A52Q3SY17 297 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 MPPE1Q53F39 396 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 TDRD12Q587J7 1177 aaKnown RBP22.84■■□□□ 1.25
VEGFA-217ENST00000518538 FAM133BQ5BKY9 247 aaKnown RBP22.84■■□□□ 1.25
VEGFA-217ENST00000518538 OTUD1Q5VV17 481 aaPredicted RBP22.84■■□□□ 1.25
VEGFA-217ENST00000518538 HGSNATQ68CP4 663 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 NADSYN1Q6IA69 706 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 GAS2L3Q86XJ1 694 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 C3orf20Q8ND61 904 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 PGAP3Q96FM1 320 aaPredicted RBP22.84■■□□□ 1.25
VEGFA-217ENST00000518538 BTN2A3PQ96KV6 586 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 DDX50Q9BQ39 737 aaKnown RBP22.84■■□□□ 1.25
VEGFA-217ENST00000518538 IRX2Q9BZI1 471 aaPredicted RBP22.84■■□□□ 1.25
VEGFA-217ENST00000518538 TMEM51Q9NW97 253 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 TAS2R14Q9NYV8 317 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 PLK2Q9NYY3 685 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 RAPGEFL1Q9UHV5 662 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 KIAA1549LQ6ZVL6 1849 aa22.84■■□□□ 1.25
VEGFA-217ENST00000518538 MYOFQ9NZM1 2061 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 SYNJ2BP-COX16A0A087WUM0 186 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 DDX3XO00571 662 aaKnown RBP eCLIP22.83■■□□□ 1.255e-16■■■□□ 15.5
VEGFA-217ENST00000518538 AP5Z1O43299 807 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 LAMTOR5O43504 91 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 RNF40O75150 1001 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 MOCS2O96007 188 aaPredicted RBP22.83■■□□□ 1.25
VEGFA-217ENST00000518538 SERPING1P05155 500 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 TCF15Q12870 199 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 PPP2R5DQ14738 602 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 ANGPT1Q15389 498 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 GRAMD4Q6IC98 578 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 TRNP1Q6NT89 227 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 PHLDB2Q86SQ0 1253 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 MCOLN2Q8IZK6 566 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 SPEM1Q8N4L4 309 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 ATP6V0D2Q8N8Y2 350 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 CCDC26Q8TAB7 109 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 DDI1Q8WTU0 396 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 RNF34Q969K3 372 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 VCPIP1Q96JH7 1222 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 TRIM5Q9C035 493 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 COX16Q9P0S2 106 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 SLC12A6Q9UHW9 1150 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 FBXO10Q9UK96 956 aa22.83■■□□□ 1.25
VEGFA-217ENST00000518538 GOLGA6L7A0A1B0GV03 622 aa22.82■■□□□ 1.24
VEGFA-217ENST00000518538 KCNU1A8MYU2 1149 aa22.82■■□□□ 1.24
VEGFA-217ENST00000518538 K7EQS6 105 aa22.82■■□□□ 1.24
VEGFA-217ENST00000518538 F9P00740 461 aa22.82■■□□□ 1.24
VEGFA-217ENST00000518538 GZMAP12544 262 aa22.82■■□□□ 1.24
VEGFA-217ENST00000518538 TFE3P19532 575 aaPredicted RBP22.82■■□□□ 1.24
VEGFA-217ENST00000518538 ABCB4P21439 1286 aa22.82■■□□□ 1.24
VEGFA-217ENST00000518538 SLC6A4P31645 630 aa22.82■■□□□ 1.24
VEGFA-217ENST00000518538 PTPN5P54829 565 aa22.82■■□□□ 1.24
VEGFA-217ENST00000518538 MTA1Q13330 715 aa22.82■■□□□ 1.24
VEGFA-217ENST00000518538 TERB1Q8NA31 727 aa22.82■■□□□ 1.24
VEGFA-217ENST00000518538 TMA16Q96EY4 203 aaKnown RBP22.82■■□□□ 1.24
VEGFA-217ENST00000518538 TBCBQ99426 244 aa22.82■■□□□ 1.24
VEGFA-217ENST00000518538 ANP32EQ9BTT0 268 aa22.82■■□□□ 1.24
VEGFA-217ENST00000518538 SELENOOQ9BVL4 669 aa22.82■■□□□ 1.24
VEGFA-217ENST00000518538 ADAM33Q9BZ11 813 aa22.82■■□□□ 1.24
VEGFA-217ENST00000518538 CALCOCO1Q9P1Z2 691 aa22.82■■□□□ 1.24
VEGFA-217ENST00000518538 XPO7Q9UIA9 1087 aaKnown RBP22.82■■□□□ 1.24
VEGFA-217ENST00000518538 TCRBV5S1A1TA0A578 114 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 TMCO5BA8MYB1 307 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 TSPAN3O60637 253 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 TPM1P09493 284 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 KRT3P12035 628 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 HNRNPH3P31942 346 aaKnown RBP22.81■■□□□ 1.24
VEGFA-217ENST00000518538 TNFRSF4P43489 277 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 DGKGP49619 791 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 CCR3P51677 355 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 DEUP1Q05D60 604 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 MPP7Q5T2T1 576 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 PIK3R6Q5UE93 754 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 RFWD3Q6PCD5 774 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 NUDT18Q6ZVK8 323 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 BNIPLQ7Z465 357 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 VPS36Q86VN1 386 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 SFTPA1Q8IWL2 248 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 EMC1Q8N766 993 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 CFAP57Q96MR6 1250 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 IRF2BPLQ9H1B7 796 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 PRMT8Q9NR22 394 aaPredicted RBP22.81■■□□□ 1.24
VEGFA-217ENST00000518538 PIGVQ9NUD9 493 aa22.81■■□□□ 1.24
VEGFA-217ENST00000518538 TBC1D3BA6NDS4 549 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms