RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 TMEM88Q6PEY1 159 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 PTCHD4Q6ZW05 846 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 KRT77Q7Z794 578 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 ARHGEF19Q8IW93 802 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 RPAP2Q8IXW5 612 aaPredicted RBP3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 TMTC2Q8N394 836 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 NGEFQ8N5V2 710 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 ANKRD44Q8N8A2 993 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 LPIN2Q92539 896 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 FKBP10Q96AY3 582 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 LENG9Q96B70 501 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 NSUN4Q96CB9 384 aaKnown RBP3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 MASTLQ96GX5 879 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 NR1H4Q96RI1 486 aaPredicted RBP3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 EIF3CQ99613 913 aaKnown RBP3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 ARHGAP39Q9C0H5 1083 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 KLC2Q9H0B6 622 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 LMAN2LQ9H0V9 348 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 MUC13Q9H3R2 512 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 ZNF768Q9H5H4 540 aaKnown RBP3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 KLC4Q9NSK0 619 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 TAS2R10Q9NYW0 307 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 EHD3Q9NZN3 535 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 HCN3Q9P1Z3 774 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 CEP72Q9P209 647 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 SEMA5BQ9P283 1151 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 GPR34Q9UPC5 381 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 CNPY2Q9Y2B0 182 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 TESMINQ9Y4I5 508 aa3.7□□□□□ -1.82
RNU6-840P-201ENST00000517275 H3BNC9 293 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 M0QYT0 321 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 TNFSF14O43557 240 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 DHX16O60231 1041 aaKnown RBP3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 TMCC2O75069 709 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 MBPP02686 304 aaPredicted RBP3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 ALDOAP04075 364 aaKnown RBP3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 ERBB2P04626 1255 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 DLDP09622 509 aaKnown RBP3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 EGR2P11161 476 aaPredicted RBP3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 NR4A1P22736 598 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 CFPP27918 469 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 ITPKBP27987 946 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 DUSP1P28562 367 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 CTGFP29279 349 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 GRK5P34947 590 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 IGHMBP2P38935 993 aaKnown RBP3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 RAD52P43351 418 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 TPTEP56180 551 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 TXNL4AP83876 142 aaKnown RBP3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 RESTQ13127 1097 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 EIF4A2Q14240 407 aaKnown RBP3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 ICAM4Q14773 271 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 TOMM20Q15388 145 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 SEC23BQ15437 767 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 SNX30Q5VWJ9 437 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 ITPRIPL1Q6GPH6 555 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 WDR93Q6P2C0 686 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 B4GALNT4Q76KP1 1039 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 LIMS2Q7Z4I7 341 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 WDR53Q7Z5U6 358 aaPredicted RBP3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 SFTPA1Q8IWL2 248 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 PDILTQ8N807 584 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 C11orf44Q8N8P7 122 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 ENDOVQ8N8Q3 282 aaKnown RBP3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 NGDNQ8NEJ9 315 aaKnown RBP3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 LINS1Q8NG48 757 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 FEZF2Q8TBJ5 459 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 RFKQ969G6 155 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 APOPT1Q96IL0 206 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 TIGD1Q96MW7 591 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 PRR25Q96S07 402 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 NUDT16L1Q9BRJ7 211 aaKnown RBP3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 THAP7Q9BT49 309 aaPredicted RBP3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 INTS2Q9H0H0 1204 aaKnown RBP3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 CCDC68Q9H2F9 335 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 STN1Q9H668 368 aaKnown RBP3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 IL21RQ9HBE5 538 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 SNX15Q9NRS6 342 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 ZDHHC7Q9NXF8 308 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 KCTD5Q9NXV2 234 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 CNOT7Q9UIV1 285 aaKnown RBP3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 TRPC5Q9UL62 973 aaPredicted RBP3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 SUFUQ9UMX1 484 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 FZD1Q9UP38 647 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 OSGIN2Q9Y236 505 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 TCAF1Q9Y4C2 921 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 ENTPD2Q9Y5L3 495 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 COPG1Q9Y678 874 aaKnown RBP3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 SPATA31A1Q5TZJ5 1347 aa3.69□□□□□ -1.82
RNU6-840P-201ENST00000517275 KAT6BQ8WYB5 2073 aa3.68□□□□□ -1.82
RNU6-840P-201ENST00000517275 A0A1W2PQM1 296 aa3.68□□□□□ -1.82
RNU6-840P-201ENST00000517275 DYTNA2CJ06 578 aa3.68□□□□□ -1.82
RNU6-840P-201ENST00000517275 OTOL1A6NHN0 477 aaPredicted RBP3.68□□□□□ -1.82
RNU6-840P-201ENST00000517275 DBX1A6NMT0 343 aa3.68□□□□□ -1.82
RNU6-840P-201ENST00000517275 GRM8O00222 908 aa3.68□□□□□ -1.82
RNU6-840P-201ENST00000517275 SPTLC2O15270 562 aa3.68□□□□□ -1.82
RNU6-840P-201ENST00000517275 MPPED1O15442 326 aa3.68□□□□□ -1.82
RNU6-840P-201ENST00000517275 PRICKLE3O43900 615 aaPredicted RBP3.68□□□□□ -1.82
RNU6-840P-201ENST00000517275 ZNF500O60304 480 aaPredicted RBP3.68□□□□□ -1.82
RNU6-840P-201ENST00000517275 PTP4A3O75365 173 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms