RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 FAT4Q6V0I7 4981 aa-0.42□□□□□ -2.48
RNU6-542P-201ENST00000516405 LINC01553A4QN01 128 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 IQCA1LA6NCM1 817 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 FAM220BPB1ANY3 271 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 ERVV-1B6SEH8 477 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 CES2O00748 559 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 ST6GAL1P15907 406 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 CTXN1P60606 82 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 ZBTB16Q05516 673 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 DLG1Q12959 904 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 TTC39AQ5SRH9 613 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 GJC2Q5T442 439 aaPredicted RBP-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 DCAF12L2Q5VW00 463 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 SLC16A12Q6ZSM3 486 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 FGD2Q7Z6J4 655 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 LRP11Q86VZ4 500 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 Q8N377 158 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 ZNF561Q8N587 486 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 OR14A16Q8NHC5 309 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 GABPB2Q8TAK5 448 aaPredicted RBP-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 PIGKQ92643 395 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 CNOT6LQ96LI5 555 aaKnown RBP-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 MAGEB10Q96LZ2 347 aaPredicted RBP-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 SELENOOQ9BVL4 669 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 GZF1Q9H116 711 aaPredicted RBP-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 TASP1Q9H6P5 420 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 DMRT3Q9NQL9 472 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 OXSMQ9NWU1 459 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 CPNE7Q9UBL6 633 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 GABBR1Q9UBS5 961 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 DDX41Q9UJV9 622 aaKnown RBP-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 ZBTB1Q9Y2K1 713 aa-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 MYBBP1AQ9BQG0 1328 aaKnown RBP-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 FLG2Q5D862 2391 aaPredicted RBP-0.43□□□□□ -2.48
RNU6-542P-201ENST00000516405 IGLV5-37A0A075B6J1 123 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 MBD3L4A6NDZ8 208 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 MBD3L3A6NE82 208 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 MBD3L5A6NJ08 208 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 F2RL2O00254 374 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 TCERG1O14776 1098 aaKnown RBP-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 FYB1O15117 783 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 ADCY3O60266 1144 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 B4GALT2O60909 372 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 PMPCBO75439 489 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 WNT1P04628 370 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 PROS1P07225 676 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 PRSS1P07477 247 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 GKP32189 559 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 IDUAP35475 653 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 SELENOVP59797 346 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 ZNF280AP59817 542 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 CCT2P78371 535 aaKnown RBP-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 CFHR3Q02985 330 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 MYBPHQ13203 477 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 MTA1Q13330 715 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 PGM5Q15124 567 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 KRTAP6-3Q3LI67 103 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 ZFP69Q49AA0 526 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 FSCBQ5H9T9 825 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 C20orf194Q5TEA3 1177 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 ARHGAP40Q5TG30 622 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 HMBOX1Q6NT76 420 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 HIBCHQ6NVY1 386 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 ZNF613Q6PF04 617 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 PTCHD4Q6ZW05 846 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 ZNF367Q7RTV3 350 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 FSTL5Q8N475 847 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 TPRX1Q8N7U7 411 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 OR13A1Q8NGR1 328 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 MBD3L2Q8NHZ7 208 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 TMEM190Q8WZ59 177 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 CENPIQ92674 756 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 USP7Q93009 1102 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 CTHRC1Q96CG8 243 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 ALG14Q96F25 216 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 SENP5Q96HI0 755 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 EBF4Q9BQW3 602 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 MCRIP2Q9BUT9 160 aaKnown RBP-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 MAGEH1Q9H213 219 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 TLR8Q9NR97 1041 aaKnown RBP-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 CCM2LQ9NUG4 571 aaPredicted RBP-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 B4GALT7Q9UBV7 327 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 EPHA6Q9UF33 1036 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 NDOR1Q9UHB4 597 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 TNKSO95271 1327 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 UMODL1Q5DID0 1318 aa-0.44□□□□□ -2.48
RNU6-542P-201ENST00000516405 IGHV4OR15-8A0A075B7B6 117 aa-0.45□□□□□ -2.48
RNU6-542P-201ENST00000516405 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP-0.45□□□□□ -2.48
RNU6-542P-201ENST00000516405 LOC105378220A0A1B0GUY1 285 aaPredicted RBP-0.45□□□□□ -2.48
RNU6-542P-201ENST00000516405 HHLA1C9JL84 531 aa-0.45□□□□□ -2.48
RNU6-542P-201ENST00000516405 H0Y9J4 135 aa-0.45□□□□□ -2.48
RNU6-542P-201ENST00000516405 NEMP1O14524 444 aa-0.45□□□□□ -2.48
RNU6-542P-201ENST00000516405 CDX4O14627 284 aaPredicted RBP-0.45□□□□□ -2.48
RNU6-542P-201ENST00000516405 TGM5O43548 720 aa-0.45□□□□□ -2.48
RNU6-542P-201ENST00000516405 CSF1RP07333 972 aa-0.45□□□□□ -2.48
RNU6-542P-201ENST00000516405 CETPP11597 493 aa-0.45□□□□□ -2.48
RNU6-542P-201ENST00000516405 GNB3P16520 340 aa-0.45□□□□□ -2.48
RNU6-542P-201ENST00000516405 ZNF19P17023 458 aa-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms