RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 ABHD16BQ9H3Z7 469 aa5.86□□□□□ -1.47
HMGCS1-207ENST00000514610 TAF1DQ9H5J8 278 aaPredicted RBP5.86□□□□□ -1.47
HMGCS1-207ENST00000514610 SEPSECSQ9HD40 501 aaKnown RBP5.86□□□□□ -1.47
HMGCS1-207ENST00000514610 SAYSD1Q9NPB0 183 aa5.86□□□□□ -1.47
HMGCS1-207ENST00000514610 GAR1Q9NY12 217 aaKnown RBP5.86□□□□□ -1.47
HMGCS1-207ENST00000514610 SEMA5BQ9P283 1151 aa5.86□□□□□ -1.47
HMGCS1-207ENST00000514610 KIF17Q9P2E2 1029 aa5.86□□□□□ -1.47
HMGCS1-207ENST00000514610 KCND3Q9UK17 655 aa5.86□□□□□ -1.47
HMGCS1-207ENST00000514610 RAB21Q9UL25 225 aa5.86□□□□□ -1.47
HMGCS1-207ENST00000514610 NFU1Q9UMS0 254 aa5.86□□□□□ -1.47
HMGCS1-207ENST00000514610 KAT6AQ92794 2004 aa5.86□□□□□ -1.47
HMGCS1-207ENST00000514610 LRRC3CA6NJW4 275 aa5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 H3BNC9 293 aa5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 H7C1Q1 480 aa5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 IRAK2O43187 625 aa5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 JTBO76095 146 aa5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 LARGE1O95461 756 aa5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 C1RP00736 705 aa5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 GPD1P21695 349 aa5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 CDK7P50613 346 aa5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 RPL15P61313 204 aaKnown RBP5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 TGFB2P61812 414 aa5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 MFSD13AQ14CX5 517 aa5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 KRTAP5-3Q6L8H2 238 aa5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 KYAT3Q6YP21 454 aaKnown RBP5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 FTSJ3Q8IY81 847 aaKnown RBP5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 GLMPQ8WWB7 406 aa5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 THAP4Q8WY91 577 aa5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 TRPC5Q9UL62 973 aaPredicted RBP5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 INSL6Q9Y581 213 aa5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 WNT6Q9Y6F9 365 aa5.85□□□□□ -1.47
HMGCS1-207ENST00000514610 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 CCDC189A1A4V9 331 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 FAM90A20PA6NIJ5 464 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 C16orf96A6NNT2 1141 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 EFCAB8A8MWE9 144 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 CLIC1O00299 241 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 HEXIM1O94992 359 aaKnown RBP5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 KAT7O95251 611 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 CYP2D6P10635 497 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 HSD3B1P14060 373 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 DUSP1P28562 367 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 SERPINA4P29622 427 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 FOXL2P58012 376 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 WDR5P61964 334 aaKnown RBP5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 LARS2Q15031 903 aaKnown RBP5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 RPS6KA2Q15349 733 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 DCDC5Q6ZRR9 648 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 HERC6Q8IVU3 1022 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 SMAP1Q8IYB5 467 aaPredicted RBP5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 OR6Y1Q8NGX8 325 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 TRIM63Q969Q1 353 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 FAR2Q96K12 515 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 SORCS2Q96PQ0 1159 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 TWSG1Q9GZX9 223 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 G6PC2Q9NQR9 355 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 RCE1Q9Y256 329 aa5.84□□□□□ -1.47
HMGCS1-207ENST00000514610 E7EVH7 732 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 SMIM22K7EJ46 135 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 KRT38O76015 456 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 IGLV2-14P01704 120 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 MATN1P21941 496 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 CCT5P48643 541 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 TAS2R50P59544 299 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 SLC14A1Q13336 389 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 KCNB1Q14721 858 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 SMAD1Q15797 465 aaKnown RBP5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 CYP26C1Q6V0L0 522 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 SYT13Q7L8C5 426 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 ANKRD18AQ8IVF6 992 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 CLEC4CQ8WTT0 213 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 AFG1LQ8WV93 481 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 CPT1BQ92523 772 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 AKAP1Q92667 903 aaKnown RBP eCLIP5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 EVI5LQ96CN4 794 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 RITA1Q96K30 269 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 HS6ST2Q96MM7 605 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 ADGRE3Q9BY15 652 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 TMPRSS5Q9H3S3 457 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 R3HDMLQ9H3Y0 253 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 LIN7CQ9NUP9 197 aaKnown RBP5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 TFCP2L1Q9NZI6 479 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 NDUFAF4Q9P032 175 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 SLC12A4Q9UP95 1085 aa5.83□□□□□ -1.48
HMGCS1-207ENST00000514610 AOX1Q06278 1338 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 WDR33Q9C0J8 1336 aaKnown RBP5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 AGAP5A6NIR3 686 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 EIF3FO00303 357 aaPredicted RBP5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 PRYO14603 147 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 TK1P04183 234 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 CYP3A4P08684 503 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 CKMT1AP12532 417 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 SFPQP23246 707 aaKnown RBP eCLIP5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 NDUFS1P28331 727 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 AGTR2P50052 363 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 PROK1P58294 105 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 RBM6P78332 1123 aaKnown RBP5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 TFF2Q03403 129 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 RNASELQ05823 741 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms