RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 BBS7Q8IWZ6 715 aa8.53□□□□□ -1.04
NEDD4-210ENST00000513957 SPEM1Q8N4L4 309 aa8.53□□□□□ -1.04
NEDD4-210ENST00000513957 WDTC1Q8N5D0 677 aa8.53□□□□□ -1.04
NEDD4-210ENST00000513957 TTC16Q8NEE8 873 aa8.53□□□□□ -1.04
NEDD4-210ENST00000513957 DQX1Q8TE96 717 aaKnown RBP8.53□□□□□ -1.04
NEDD4-210ENST00000513957 BAP1Q92560 729 aa8.53□□□□□ -1.04
NEDD4-210ENST00000513957 CHFRQ96EP1 664 aa8.53□□□□□ -1.04
NEDD4-210ENST00000513957 NAP1L5Q96NT1 182 aaPredicted RBP8.53□□□□□ -1.04
NEDD4-210ENST00000513957 SLC2A13Q96QE2 648 aa8.53□□□□□ -1.04
NEDD4-210ENST00000513957 XPO6Q96QU8 1125 aaKnown RBP8.53□□□□□ -1.04
NEDD4-210ENST00000513957 ANP32EQ9BTT0 268 aa8.53□□□□□ -1.04
NEDD4-210ENST00000513957 SLC2A11Q9BYW1 496 aa8.53□□□□□ -1.04
NEDD4-210ENST00000513957 ADAM33Q9BZ11 813 aa8.53□□□□□ -1.04
NEDD4-210ENST00000513957 LINC00597Q9H2U6 94 aa8.53□□□□□ -1.04
NEDD4-210ENST00000513957 PRMT8Q9NR22 394 aaPredicted RBP8.53□□□□□ -1.04
NEDD4-210ENST00000513957 NDRG2Q9UN36 371 aaKnown RBP8.53□□□□□ -1.04
NEDD4-210ENST00000513957 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.53□□□□□ -1.04
NEDD4-210ENST00000513957 BZW2Q9Y6E2 419 aaKnown RBP8.53□□□□□ -1.04
NEDD4-210ENST00000513957 PLXND1Q9Y4D7 1925 aa8.52□□□□□ -1.04
NEDD4-210ENST00000513957 DOCK4Q8N1I0 1966 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 CACNA1IQ9P0X4 2223 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 TYW5A2RUC4 315 aaKnown RBP8.52□□□□□ -1.05
NEDD4-210ENST00000513957 MDM4O15151 490 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 LAMTOR5O43504 91 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 PI15O43692 258 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 PENKP01210 267 aaPredicted RBP8.52□□□□□ -1.05
NEDD4-210ENST00000513957 CALCAP01258 141 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 APOEP02649 317 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 ERBB2P04626 1255 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 APODP05090 189 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 CALB1P05937 261 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 FYNP06241 537 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 DCNP07585 359 aaKnown RBP8.52□□□□□ -1.05
NEDD4-210ENST00000513957 MMEP08473 750 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 UNGP13051 313 aaPredicted RBP8.52□□□□□ -1.05
NEDD4-210ENST00000513957 CD72P21854 359 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 GRIA2P42262 883 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 MATKP42679 507 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 TNFRSF4P43489 277 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 NSFP46459 744 aaKnown RBP8.52□□□□□ -1.05
NEDD4-210ENST00000513957 SOX9P48436 509 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 NRLP54845 237 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 TBX4P57082 545 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 MRPS21P82921 87 aaKnown RBP8.52□□□□□ -1.05
NEDD4-210ENST00000513957 CDK17Q00537 523 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 EIF4EBP2Q13542 120 aaPredicted RBP8.52□□□□□ -1.05
NEDD4-210ENST00000513957 PON2Q15165 354 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 GAB4Q2WGN9 574 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 LY6G5CQ5SRR4 150 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 ADGRF1Q5T601 910 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 SFMBT2Q5VUG0 894 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 ZC3H14Q6PJT7 736 aaKnown RBP8.52□□□□□ -1.05
NEDD4-210ENST00000513957 FAM183BPQ6ZVS7 135 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 TRMT11Q7Z4G4 463 aaKnown RBP8.52□□□□□ -1.05
NEDD4-210ENST00000513957 PHF13Q86YI8 300 aaPredicted RBP8.52□□□□□ -1.05
NEDD4-210ENST00000513957 ETFBKMTQ8IXQ9 262 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 CLEC4CQ8WTT0 213 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 EDEM1Q92611 657 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 ACDQ96AP0 544 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 PGAP3Q96FM1 320 aaPredicted RBP8.52□□□□□ -1.05
NEDD4-210ENST00000513957 SLC39A13Q96H72 371 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 VCPIP1Q96JH7 1222 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 PNKPQ96T60 521 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 BBS2Q9BXC9 721 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 LMAN1LQ9HAT1 526 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.52□□□□□ -1.05
NEDD4-210ENST00000513957 DEC1Q9P2X7 70 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 SLC12A6Q9UHW9 1150 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 NUDT5Q9UKK9 219 aa8.52□□□□□ -1.05
NEDD4-210ENST00000513957 AGO1Q9UL18 857 aaKnown RBP8.52□□□□□ -1.05
NEDD4-210ENST00000513957 MYO18AQ92614 2054 aaKnown RBP8.52□□□□□ -1.05
NEDD4-210ENST00000513957 CCDC163A0A0D9SF12 145 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 LRRC53A6NM62 1247 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 NEDD8-MDP1E9PL57 170 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 PIK3R2O00459 728 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 NPC1O15118 1278 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 KAT7O95251 611 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 TRUB2O95900 331 aaKnown RBP8.51□□□□□ -1.05
NEDD4-210ENST00000513957 F9P00740 461 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 KLKB1P03952 638 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 TYRP14679 529 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 DESP17661 470 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 HOXA6P31267 233 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 CCR1P32246 355 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 OPRD1P41143 372 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 GALK1P51570 392 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 TCF15Q12870 199 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 EIF4HQ15056 248 aaKnown RBP8.51□□□□□ -1.05
NEDD4-210ENST00000513957 ANGPT1Q15389 498 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 ASIC2Q16515 512 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 ANO4Q32M45 955 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 MPPE1Q53F39 396 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 DCAF6Q58WW2 860 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 BRMS1LQ5PSV4 323 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 FAM102AQ5T9C2 384 aaPredicted RBP8.51□□□□□ -1.05
NEDD4-210ENST00000513957 TTC39BQ5VTQ0 682 aaPredicted RBP8.51□□□□□ -1.05
NEDD4-210ENST00000513957 TAF3Q5VWG9 929 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 FYB2Q5VWT5 728 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 NAA35Q5VZE5 725 aa8.51□□□□□ -1.05
NEDD4-210ENST00000513957 RNF43Q68DV7 783 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms