RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 PBX1P40424 430 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 TBX4P57082 545 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 NOMO3P69849 1222 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 SLC6A3Q01959 620 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 UBXN1Q04323 297 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 PTP4A2Q12974 167 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 DMC1Q14565 340 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 CRY1Q16526 586 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 SKOR2Q2VWA4 1001 aaPredicted RBP10.11□□□□□ -0.79
RNF4-221ENST00000513643 ANO4Q32M45 955 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 PREPLQ4J6C6 727 aaPredicted RBP10.11□□□□□ -0.79
RNF4-221ENST00000513643 PIK3R6Q5UE93 754 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 OTUD1Q5VV17 481 aaPredicted RBP10.11□□□□□ -0.79
RNF4-221ENST00000513643 NUGGCQ68CJ6 796 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 TMEM92Q6UXU6 159 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 TPGS1Q6ZTW0 290 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 TOGARAM2Q6ZUX3 1019 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 FAM183BPQ6ZVS7 135 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 IRF2BP2Q7Z5L9 587 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 TAC4Q86UU9 113 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 PASD1Q8IV76 773 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 UNC45BQ8IWX7 931 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.11□□□□□ -0.79
RNF4-221ENST00000513643 ANKRD20A12PQ8NF67 263 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 ATRIPQ8WXE1 791 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 BAP1Q92560 729 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 ACDQ96AP0 544 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 MYEOVQ96EZ4 313 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 SERPINB11Q96P15 392 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 XPO6Q96QU8 1125 aaKnown RBP10.11□□□□□ -0.79
RNF4-221ENST00000513643 PCDHB18PQ96TA0 734 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 TTYH3Q9C0H2 523 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 CBX8Q9HC52 389 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 CALCOCO1Q9P1Z2 691 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 TMEM59LQ9UK28 342 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 MMP17Q9ULZ9 603 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 MYO6Q9UM54 1294 aa10.11□□□□□ -0.79
RNF4-221ENST00000513643 A0A1W2PQF6 199 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 TBC1D3BA6NDS4 549 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 SGK1O00141 431 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 ACSL4O60488 711 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 GFPT2O94808 682 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 TRUB2O95900 331 aaKnown RBP10.1□□□□□ -0.79
RNF4-221ENST00000513643 MMP8P22894 467 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 STAT1P42224 750 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 FNTBP49356 437 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 DGKGP49619 791 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 GSCP56915 257 aaPredicted RBP10.1□□□□□ -0.79
RNF4-221ENST00000513643 SNX16P57768 344 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 ZSCAN23Q3MJ62 389 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 MPPE1Q53F39 396 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 C2orf27AQ580R0 203 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 TMEM215Q68D42 235 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 GRAMD4Q6IC98 578 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 TRNP1Q6NT89 227 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 XYLT1Q86Y38 959 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 DEFB106AQ8N104 65 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 SLC20A1Q8WUM9 679 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 GOLGA1Q92805 767 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 FAM149B1Q96BN6 582 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 PGAP3Q96FM1 320 aaPredicted RBP10.1□□□□□ -0.79
RNF4-221ENST00000513643 NOX5Q96PH1 765 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 NPY6RQ99463 290 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 PRMT1Q99873 361 aaKnown RBP10.1□□□□□ -0.79
RNF4-221ENST00000513643 GABRG3Q99928 467 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 NLRC4Q9NPP4 1024 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 DNAJC17Q9NVM6 304 aaKnown RBP10.1□□□□□ -0.79
RNF4-221ENST00000513643 PLK2Q9NYY3 685 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 SDK1Q7Z5N4 2213 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 KIAA1549LQ6ZVL6 1849 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 DNAH14Q0VDD8 3507 aa10.1□□□□□ -0.79
RNF4-221ENST00000513643 GOLGA6L7A0A1B0GV03 622 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 TCRBV5S1A1TA0A578 114 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 I6L893 689 aaPredicted RBP10.09□□□□□ -0.79
RNF4-221ENST00000513643 GFRA3O60609 400 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 DAB1O75553 588 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 ENDOD1O94919 500 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 TGM1P22735 817 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 NOS2P35228 1153 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 MATKP42679 507 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 SLC11A2P49281 568 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 SGSHP51688 502 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 DGKEP52429 567 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 KDSRQ06136 332 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 GEN1Q17RS7 908 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 C5orf22Q49AR2 442 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 DCAF6Q58WW2 860 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 FIGNQ5HY92 759 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 TAF3Q5VWG9 929 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 ADIPOR2Q86V24 386 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 LUZP1Q86V48 1076 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 ALLCQ8N6M5 410 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 TXNDC5Q8NBS9 432 aaKnown RBP10.09□□□□□ -0.79
RNF4-221ENST00000513643 NEK11Q8NG66 645 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 ADAM32Q8TC27 787 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 C18orf8Q96DM3 657 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 TMA16Q96EY4 203 aaKnown RBP10.09□□□□□ -0.79
RNF4-221ENST00000513643 PRICKLE1Q96MT3 831 aaPredicted RBP10.09□□□□□ -0.79
RNF4-221ENST00000513643 EDEM3Q9BZQ6 932 aa10.09□□□□□ -0.79
RNF4-221ENST00000513643 TMEM51Q9NW97 253 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms