RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 SPTBN2O15020 2390 aa6.77□□□□□ -1.32
KDM3B-208ENST00000512928 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.77□□□□□ -1.33
KDM3B-208ENST00000512928 GOLGA6L7A0A1B0GV03 622 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 TYW5A2RUC4 315 aaKnown RBP6.77□□□□□ -1.33
KDM3B-208ENST00000512928 LRRC10BA6NIK2 292 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 FOXN3O00409 490 aaPredicted RBP6.77□□□□□ -1.33
KDM3B-208ENST00000512928 PAPSS1O43252 624 aaPredicted RBP6.77□□□□□ -1.33
KDM3B-208ENST00000512928 TBL1XO60907 577 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 ADAM23O75077 832 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 GRAP2O75791 330 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 RHOBTB1O94844 696 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 CAVIN2O95810 425 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 PENKP01210 267 aaPredicted RBP6.77□□□□□ -1.33
KDM3B-208ENST00000512928 APOEP02649 317 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 HNRNPLP14866 589 aaKnown RBP eCLIP6.77□□□□□ -1.33
KDM3B-208ENST00000512928 CDK11BP21127 795 aaKnown RBP6.77□□□□□ -1.33
KDM3B-208ENST00000512928 NTSR1P30989 418 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 DHPSP49366 369 aaPredicted RBP6.77□□□□□ -1.33
KDM3B-208ENST00000512928 ZNF445P59923 1031 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 YWHAZP63104 245 aaKnown RBP6.77□□□□□ -1.33
KDM3B-208ENST00000512928 STARD3Q14849 445 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 DRAP1Q14919 205 aaPredicted RBP6.77□□□□□ -1.33
KDM3B-208ENST00000512928 IQCB1Q15051 598 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 KRT31Q15323 416 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 TRIP4Q15650 581 aaPredicted RBP6.77□□□□□ -1.33
KDM3B-208ENST00000512928 GEN1Q17RS7 908 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 AASDHQ4L235 1098 aaPredicted RBP6.77□□□□□ -1.33
KDM3B-208ENST00000512928 DCAF6Q58WW2 860 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 ADGRF1Q5T601 910 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 NUGGCQ68CJ6 796 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 OR6B2Q6IFH4 312 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 RFWD3Q6PCD5 774 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 KIAA1324Q6UXG2 1013 aaKnown RBP6.77□□□□□ -1.33
KDM3B-208ENST00000512928 ANKS1BQ7Z6G8 1248 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 TAC4Q86UU9 113 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 CCDC117Q8IWD4 279 aaPredicted RBP6.77□□□□□ -1.33
KDM3B-208ENST00000512928 UNC45BQ8IWX7 931 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 SCML4Q8N228 414 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 CPXM2Q8N436 756 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 DQX1Q8TE96 717 aaKnown RBP6.77□□□□□ -1.33
KDM3B-208ENST00000512928 IPO4Q8TEX9 1081 aaKnown RBP6.77□□□□□ -1.33
KDM3B-208ENST00000512928 UCMAQ8WVF2 138 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 RLN3Q8WXF3 142 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 TMA16Q96EY4 203 aaKnown RBP6.77□□□□□ -1.33
KDM3B-208ENST00000512928 PPP1R13BQ96KQ4 1090 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 SMOC1Q9H4F8 434 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 POPDC2Q9HBU9 364 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 SIX2Q9NPC8 291 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 FAM207AQ9NSI2 230 aaPredicted RBP6.77□□□□□ -1.33
KDM3B-208ENST00000512928 SEMA4GQ9NTN9 838 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 FANCLQ9NW38 375 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 EBF1Q9UH73 591 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 CYTH4Q9UIA0 394 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 CDV3Q9UKY7 258 aaKnown RBP6.77□□□□□ -1.33
KDM3B-208ENST00000512928 FHOD1Q9Y613 1164 aa6.77□□□□□ -1.33
KDM3B-208ENST00000512928 A0A0A0MRY4 1105 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 WASH3PC4AMC7 463 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 ACSL4O60488 711 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 SYNCRIPO60506 623 aaKnown RBP6.76□□□□□ -1.33
KDM3B-208ENST00000512928 ERBB2P04626 1255 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 CISD3P0C7P0 127 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 UCHL3P15374 230 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 CYP11B1P15538 503 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 BCKDHBP21953 392 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 HOXD9P28356 352 aaPredicted RBP6.76□□□□□ -1.33
KDM3B-208ENST00000512928 MPLP40238 635 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 KLK7P49862 253 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 SGSHP51688 502 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 SNX16P57768 344 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 BPIFB4P59827 614 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 RNASE9P60153 205 aaKnown RBP6.76□□□□□ -1.33
KDM3B-208ENST00000512928 CDK17Q00537 523 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 FOXK2Q01167 660 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 MYL5Q02045 173 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 NME3Q13232 169 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 CDH18Q13634 790 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 SF3A2Q15428 464 aaKnown RBP6.76□□□□□ -1.33
KDM3B-208ENST00000512928 TAF5Q15542 800 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 MEA1Q16626 185 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 PLK5Q496M5 336 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 FNDC3BQ53EP0 1204 aaKnown RBP6.76□□□□□ -1.33
KDM3B-208ENST00000512928 KLHDC7AQ5VTJ3 777 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 SYPL2Q5VXT5 272 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 KIAA1211LQ6NV74 962 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 DPY19L2P1Q6NXN4 242 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 MSANTD2Q6P1R3 559 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 SERPINA13PQ6UXR4 307 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 PRR23CQ6ZRP0 262 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 FAM183BPQ6ZVS7 135 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 CYP2U1Q7Z449 544 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 C11orf74Q86VG3 221 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 RASSF3Q86WH2 238 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 CHSY1Q86X52 802 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 MFN1Q8IWA4 741 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 DHX40Q8IX18 779 aaKnown RBP6.76□□□□□ -1.33
KDM3B-208ENST00000512928 CFAP52Q8N1V2 620 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 CARNMT1Q8N4J0 409 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 DEFB119Q8N690 84 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 AOPEPQ8N6M6 819 aa6.76□□□□□ -1.33
KDM3B-208ENST00000512928 FRMD1Q8N878 549 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms