RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 PFKFB4Q16877 469 aa6.12□□□□□ -1.43
CHD1-209ENST00000512844 ZKSCAN2Q63HK3 967 aa6.12□□□□□ -1.43
CHD1-209ENST00000512844 MSANTD2Q6P1R3 559 aa6.12□□□□□ -1.43
CHD1-209ENST00000512844 WDR93Q6P2C0 686 aa6.12□□□□□ -1.43
CHD1-209ENST00000512844 KLHL17Q6TDP4 642 aa6.12□□□□□ -1.43
CHD1-209ENST00000512844 RINLQ6ZS11 566 aa6.12□□□□□ -1.43
CHD1-209ENST00000512844 CCDC117Q8IWD4 279 aaPredicted RBP6.12□□□□□ -1.43
CHD1-209ENST00000512844 ATG16L2Q8NAA4 619 aa6.12□□□□□ -1.43
CHD1-209ENST00000512844 SLC22A17Q8WUG5 538 aa6.12□□□□□ -1.43
CHD1-209ENST00000512844 PIGKQ92643 395 aa6.12□□□□□ -1.43
CHD1-209ENST00000512844 VOPP1Q96AW1 172 aa6.12□□□□□ -1.43
CHD1-209ENST00000512844 QTRT1Q9BXR0 403 aaKnown RBP6.12□□□□□ -1.43
CHD1-209ENST00000512844 TP63Q9H3D4 680 aaPredicted RBP6.12□□□□□ -1.43
CHD1-209ENST00000512844 CDCP1Q9H5V8 836 aa6.12□□□□□ -1.43
CHD1-209ENST00000512844 CCDC134Q9H6E4 229 aa6.12□□□□□ -1.43
CHD1-209ENST00000512844 PRDM16Q9HAZ2 1276 aa6.12□□□□□ -1.43
CHD1-209ENST00000512844 IPO11Q9UI26 975 aaKnown RBP6.12□□□□□ -1.43
CHD1-209ENST00000512844 SCAF8Q9UPN6 1271 aaKnown RBP6.12□□□□□ -1.43
CHD1-209ENST00000512844 ZNF804BA4D1E1 1349 aa6.11□□□□□ -1.43
CHD1-209ENST00000512844 DNPH1O43598 174 aa6.11□□□□□ -1.43
CHD1-209ENST00000512844 CER1O95813 267 aa6.11□□□□□ -1.43
CHD1-209ENST00000512844 ATF7P17544 494 aaPredicted RBP6.11□□□□□ -1.43
CHD1-209ENST00000512844 NDUFS1P28331 727 aa6.11□□□□□ -1.43
CHD1-209ENST00000512844 HSF1Q00613 529 aa6.11□□□□□ -1.43
CHD1-209ENST00000512844 RNASELQ05823 741 aaKnown RBP6.11□□□□□ -1.43
CHD1-209ENST00000512844 TRIM14Q14142 442 aa6.11□□□□□ -1.43
CHD1-209ENST00000512844 GRM4Q14833 912 aa6.11□□□□□ -1.43
CHD1-209ENST00000512844 CCDC38Q502W7 563 aa6.11□□□□□ -1.43
CHD1-209ENST00000512844 MORN5Q5VZ52 161 aa6.11□□□□□ -1.43
CHD1-209ENST00000512844 TRABD2AQ86V40 505 aa6.11□□□□□ -1.43
CHD1-209ENST00000512844 ADPRHL1Q8NDY3 354 aa6.11□□□□□ -1.43
CHD1-209ENST00000512844 DENND1AQ8TEH3 1009 aa6.11□□□□□ -1.43
CHD1-209ENST00000512844 STYXQ8WUJ0 223 aa6.11□□□□□ -1.43
CHD1-209ENST00000512844 KAT2BQ92831 832 aa6.11□□□□□ -1.43
CHD1-209ENST00000512844 MAP4K1Q92918 833 aa6.11□□□□□ -1.43
CHD1-209ENST00000512844 RMDN3Q96TC7 470 aa6.11□□□□□ -1.43
CHD1-209ENST00000512844 BRD8Q9H0E9 1235 aa6.11□□□□□ -1.43
CHD1-209ENST00000512844 FSCN3Q9NQT6 498 aa6.11□□□□□ -1.43
CHD1-209ENST00000512844 DACT1Q9NYF0 836 aa6.11□□□□□ -1.43
CHD1-209ENST00000512844 EFCAB8A8MWE9 144 aa6.1□□□□□ -1.43
CHD1-209ENST00000512844 SYT5O00445 386 aa6.1□□□□□ -1.43
CHD1-209ENST00000512844 ALDOAP04075 364 aaKnown RBP6.1□□□□□ -1.43
CHD1-209ENST00000512844 KLRK1P26718 216 aa6.1□□□□□ -1.43
CHD1-209ENST00000512844 HOXD12P35452 270 aa6.1□□□□□ -1.43
CHD1-209ENST00000512844 MTA1Q13330 715 aa6.1□□□□□ -1.43
CHD1-209ENST00000512844 RPS6KA2Q15349 733 aa6.1□□□□□ -1.43
CHD1-209ENST00000512844 SUPT20HL1Q3ZLR7 823 aa6.1□□□□□ -1.43
CHD1-209ENST00000512844 SLC9C1Q4G0N8 1177 aa6.1□□□□□ -1.43
CHD1-209ENST00000512844 ZNF626Q68DY1 528 aa6.1□□□□□ -1.43
CHD1-209ENST00000512844 SLC2A7Q6PXP3 512 aa6.1□□□□□ -1.43
CHD1-209ENST00000512844 ZNF398Q8TD17 642 aa6.1□□□□□ -1.43
CHD1-209ENST00000512844 RSC1A1Q92681 617 aa6.1□□□□□ -1.43
CHD1-209ENST00000512844 KAZALD1Q96I82 304 aa6.1□□□□□ -1.43
CHD1-209ENST00000512844 PAAF1Q9BRP4 392 aa6.1□□□□□ -1.43
CHD1-209ENST00000512844 PRSS22Q9GZN4 317 aa6.1□□□□□ -1.43
CHD1-209ENST00000512844 HERC5Q9UII4 1024 aaKnown RBP6.1□□□□□ -1.43
CHD1-209ENST00000512844 TBC1D3DA0A087WVF3 549 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 TBC1D3IA0A087WXS9 549 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 TBC1D3EA0A087X179 549 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 CYP2D7A0A087X1C5 515 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 TBC1D3KA0A087X1G2 549 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 hCG_1642624A0A1W2PR95 340 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 TBC1D3BA6NDS4 549 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 TBC1D3FA6NER0 549 aaPredicted RBP6.09□□□□□ -1.43
CHD1-209ENST00000512844 CGB1A6NKQ9 187 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 TBC1D3LB9A6J9 549 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 PEX14O75381 377 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 TNFRSF6BO95407 300 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 LARGE1O95461 756 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 MBPP02686 304 aaPredicted RBP6.09□□□□□ -1.43
CHD1-209ENST00000512844 CSTBP04080 98 aaKnown RBP6.09□□□□□ -1.43
CHD1-209ENST00000512844 TBC1D3HP0C7X1 549 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 GRK5P34947 590 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 AGTR2P50052 363 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 SLC12A2P55011 1212 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 YPEL5P62699 121 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 ZNF91Q05481 1191 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 TRIP6Q15654 476 aaKnown RBP6.09□□□□□ -1.43
CHD1-209ENST00000512844 COLEC12Q5KU26 742 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 PXDC1Q5TGL8 231 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 MEX3CQ5U5Q3 659 aaKnown RBP6.09□□□□□ -1.43
CHD1-209ENST00000512844 TBC1D3GQ6DHY5 549 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 TBC1D3CQ6IPX1 549 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 KYAT3Q6YP21 454 aaKnown RBP6.09□□□□□ -1.43
CHD1-209ENST00000512844 RAB11FIP2Q7L804 512 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 TBC1D3Q8IZP1 549 aaPredicted RBP6.09□□□□□ -1.43
CHD1-209ENST00000512844 HMGB4Q8WW32 186 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 FCRL5Q96RD9 977 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 RTKNQ9BST9 563 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 PAGR1Q9BTK6 254 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 ELOVL1Q9BW60 279 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 KATNAL1Q9BW62 490 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 SLC8A2Q9UPR5 921 aa6.09□□□□□ -1.43
CHD1-209ENST00000512844 GXYLT2A0PJZ3 443 aa6.08□□□□□ -1.44
CHD1-209ENST00000512844 WDR91A4D1P6 747 aa6.08□□□□□ -1.44
CHD1-209ENST00000512844 C3orf70A6NLC5 250 aaPredicted RBP6.08□□□□□ -1.44
CHD1-209ENST00000512844 TRIM38O00635 465 aa6.08□□□□□ -1.44
CHD1-209ENST00000512844 NKX2-8O15522 239 aa6.08□□□□□ -1.44
CHD1-209ENST00000512844 EIF5BO60841 1220 aaKnown RBP6.08□□□□□ -1.44
CHD1-209ENST00000512844 BCAR3O75815 825 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms