RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 NTSR1P30989 418 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 GBP1P32455 592 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 KRT9P35527 623 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 COPB1P53618 953 aaKnown RBP13.83□□□□□ -0.2
RNF4-215ENST00000511843 MYL5Q02045 173 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 TYRO3Q06418 890 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 PLK5Q496M5 336 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 PREPLQ4J6C6 727 aaPredicted RBP13.83□□□□□ -0.2
RNF4-215ENST00000511843 PTPN20Q4JDL3 420 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 FAM133BQ5BKY9 247 aaKnown RBP13.83□□□□□ -0.2
RNF4-215ENST00000511843 ADGRF1Q5T601 910 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 NADSYN1Q6IA69 706 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 CAVIN1Q6NZI2 390 aaKnown RBP13.83□□□□□ -0.2
RNF4-215ENST00000511843 NUDT18Q6ZVK8 323 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 FAM183BPQ6ZVS7 135 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 CACNA2D4Q7Z3S7 1137 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 CHPFQ8IZ52 775 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 PGBD3Q8N328 593 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 AOPEPQ8N6M6 819 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 WFDC5Q8TCV5 224 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 PPP1R13BQ96KQ4 1090 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 SLC6A17Q9H1V8 727 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 ARRDC1-AS1Q9H2J1 176 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 SMOC1Q9H4F8 434 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 FAM207AQ9NSI2 230 aaPredicted RBP13.83□□□□□ -0.2
RNF4-215ENST00000511843 COX16Q9P0S2 106 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 XPO7Q9UIA9 1087 aaKnown RBP13.83□□□□□ -0.2
RNF4-215ENST00000511843 STARD13Q9Y3M8 1113 aa13.83□□□□□ -0.2
RNF4-215ENST00000511843 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.83□□□□□ -0.2
RNF4-215ENST00000511843 ADAMTS9Q9P2N4 1935 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 A0A1W2PQF6 199 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 F8VZ95 297 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 CAPN9O14815 690 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 SART1O43290 800 aaKnown RBP13.82□□□□□ -0.2
RNF4-215ENST00000511843 ACSL4O60488 711 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 TBL1XO60907 577 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 CYP11B1P15538 503 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 GABRG2P18507 467 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 YWHAZP63104 245 aaKnown RBP13.82□□□□□ -0.2
RNF4-215ENST00000511843 NCAPHQ15003 741 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 HSF5Q4G112 596 aaPredicted RBP13.82□□□□□ -0.2
RNF4-215ENST00000511843 MPPE1Q53F39 396 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 TMEM215Q68D42 235 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 OR6B2Q6IFH4 312 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 NOP9Q86U38 636 aaKnown RBP13.82□□□□□ -0.2
RNF4-215ENST00000511843 RMDN1Q96DB5 314 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 TMA16Q96EY4 203 aaKnown RBP13.82□□□□□ -0.2
RNF4-215ENST00000511843 PRICKLE1Q96MT3 831 aaPredicted RBP13.82□□□□□ -0.2
RNF4-215ENST00000511843 SERPINB11Q96P15 392 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 CIPCQ9C0C6 399 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 NUCKS1Q9H1E3 243 aaKnown RBP13.82□□□□□ -0.2
RNF4-215ENST00000511843 LHX5Q9H2C1 402 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 HSD3B7Q9H2F3 369 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 POPDC2Q9HBU9 364 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 POLMQ9NP87 494 aaPredicted RBP13.82□□□□□ -0.2
RNF4-215ENST00000511843 NLRC4Q9NPP4 1024 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 STIM2Q9P246 746 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 STOML2Q9UJZ1 356 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 SLC27A6Q9Y2P4 619 aa13.82□□□□□ -0.2
RNF4-215ENST00000511843 ALDH1A2O94788 518 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 GFPT2O94808 682 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 ATP1A3P13637 1013 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 HLA-FP30511 346 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 IL12RB1P42701 662 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 SLC11A2P49281 568 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 POLR2FP61218 127 aaKnown RBP13.81□□□□□ -0.2
RNF4-215ENST00000511843 RING1Q06587 406 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 SF3A2Q15428 464 aaKnown RBP13.81□□□□□ -0.2
RNF4-215ENST00000511843 ANO6Q4KMQ2 910 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 USP39Q53GS9 565 aaKnown RBP13.81□□□□□ -0.2
RNF4-215ENST00000511843 C2CD6Q53TS8 623 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 DCAF6Q58WW2 860 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 ZC3H12AQ5D1E8 599 aaKnown RBP13.81□□□□□ -0.2
RNF4-215ENST00000511843 PIK3R6Q5UE93 754 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 NUGGCQ68CJ6 796 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 TRMT11Q7Z4G4 463 aaKnown RBP13.81□□□□□ -0.2
RNF4-215ENST00000511843 ANKS1BQ7Z6G8 1248 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 UNC45BQ8IWX7 931 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 DEFB106AQ8N104 65 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 CFAP52Q8N1V2 620 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 OLIG1Q8TAK6 271 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 SLC20A1Q8WUM9 679 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 DDX1Q92499 740 aaKnown RBP13.81□□□□□ -0.2
RNF4-215ENST00000511843 SLC39A13Q96H72 371 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 ZC3H10Q96K80 434 aaKnown RBP13.81□□□□□ -0.2
RNF4-215ENST00000511843 PDCL3Q9H2J4 239 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 CD248Q9HCU0 757 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 CD93Q9NPY3 652 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 SEMA4GQ9NTN9 838 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 TLR6Q9Y2C9 796 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 SIK3Q9Y2K2 1263 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 STON1Q9Y6Q2 735 aa13.81□□□□□ -0.2
RNF4-215ENST00000511843 IRAK2O43187 625 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 EPN2O95208 641 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 LATS1O95835 1130 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 TRUB2O95900 331 aaKnown RBP13.8□□□□□ -0.2
RNF4-215ENST00000511843 IGLV3-25P01717 112 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 TPM2P07951 284 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 MMEP08473 750 aa13.8□□□□□ -0.2
RNF4-215ENST00000511843 NDUFV2P19404 249 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms