RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 BBS12Q6ZW61 710 aa17.34■□□□□ 0.37
SCAMP1-203ENST00000510030 PDZD4Q76G19 769 aaPredicted RBP17.34■□□□□ 0.37
SCAMP1-203ENST00000510030 DDX42Q86XP3 938 aaKnown RBP eCLIP17.34■□□□□ 0.37
SCAMP1-203ENST00000510030 CCDC185Q8N715 623 aa17.34■□□□□ 0.37
SCAMP1-203ENST00000510030 MYRIPQ8NFW9 859 aa17.34■□□□□ 0.37
SCAMP1-203ENST00000510030 CCDC26Q8TAB7 109 aa17.34■□□□□ 0.37
SCAMP1-203ENST00000510030 RAPGEF5Q92565 580 aa17.34■□□□□ 0.37
SCAMP1-203ENST00000510030 UBXN4Q92575 508 aa17.34■□□□□ 0.37
SCAMP1-203ENST00000510030 AZIN2Q96A70 460 aa17.34■□□□□ 0.37
SCAMP1-203ENST00000510030 FAF2Q96CS3 445 aa17.34■□□□□ 0.37
SCAMP1-203ENST00000510030 SLC39A13Q96H72 371 aa17.34■□□□□ 0.37
SCAMP1-203ENST00000510030 C1orf74Q96LT6 269 aa17.34■□□□□ 0.37
SCAMP1-203ENST00000510030 DDX50Q9BQ39 737 aaKnown RBP17.34■□□□□ 0.37
SCAMP1-203ENST00000510030 PRKD2Q9BZL6 878 aa17.34■□□□□ 0.37
SCAMP1-203ENST00000510030 RETREG1Q9H6L5 497 aa17.34■□□□□ 0.37
SCAMP1-203ENST00000510030 CHD7Q9P2D1 2997 aa17.34■□□□□ 0.37
SCAMP1-203ENST00000510030 OBSL1O75147 1896 aa17.33■□□□□ 0.37
SCAMP1-203ENST00000510030 REV3LO60673 3130 aa17.33■□□□□ 0.37
SCAMP1-203ENST00000510030 C3orf70A6NLC5 250 aaPredicted RBP17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 PI4K2BG5E9Z4 385 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 FGF10O15520 208 aaPredicted RBP17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 LATS1O95835 1130 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 IGLV3-27P01718 113 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 EPCAMP16422 314 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 TGM2P21980 687 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 NRIP1P48552 1158 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 SLC11A2P49281 568 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 FNTAP49354 379 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 ARSEP51690 589 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 PITX1P78337 314 aaPredicted RBP17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 KLF1Q13351 362 aaPredicted RBP17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 ATP13A4Q4VNC1 1196 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 MAATS1Q7Z4T9 603 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 MIB1Q86YT6 1006 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 TMC8Q8IU68 726 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 MMGT1Q8N4V1 131 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 C12orf50Q8NA57 414 aaPredicted RBP17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 GRK7Q8WTQ7 553 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 RUBCNQ92622 972 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 CORO1BQ9BR76 489 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 ADAM33Q9BZ11 813 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 DCLK3Q9C098 648 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 CCSER2Q9H7U1 834 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 KLHL11Q9NVR0 708 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 SFMBT1Q9UHJ3 866 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 RAD54BQ9Y620 910 aa17.33■□□□□ 0.36
SCAMP1-203ENST00000510030 TRAV19A0A0A6YYK7 116 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 SLC12A8A0AV02 714 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 KCNU1A8MYU2 1149 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 APOC4-APOC2K7ER74 178 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 RFXAPO00287 272 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 EEF2KO00418 725 aaKnown RBP17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 APOL1O14791 398 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 CCL16O15467 120 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 DAPK3O43293 454 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 COCHO43405 550 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 PHF2O75151 1096 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 TADA3O75528 432 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 OLFM2O95897 454 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 APOC2P02655 101 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 SERPINB6P35237 376 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 NR2C2P49116 596 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 TPI1P60174 286 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 CCNG2Q16589 344 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 CYP1B1Q16678 543 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 ANKRD20A8PQ5CZ79 823 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 ZC3H12AQ5D1E8 599 aaKnown RBP17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 LRRC31Q6UY01 552 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 TMEM184AQ6ZMB5 413 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 RFX6Q8HWS3 928 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 TSC1Q92574 1164 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 HAUS1Q96CS2 278 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 RNF157Q96PX1 679 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 ATXN3LQ9H3M9 355 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 PIDD1Q9HB75 910 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 IL21Q9HBE4 155 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 CALCOCO1Q9P1Z2 691 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 OR12D3Q9UGF7 316 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 ZNF510Q9Y2H8 683 aa17.32■□□□□ 0.36
SCAMP1-203ENST00000510030 ATG2AQ2TAZ0 1938 aa17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 DENND4CQ5VZ89 1909 aa17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 PDE2AO00408 941 aaPredicted RBP17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 MSI1O43347 362 aaKnown RBP17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 MYL4P12829 197 aa17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 HOXB8P17481 243 aaPredicted RBP17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 IGFBP4P22692 258 aa17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 MCM3P25205 808 aa17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 ATXN1P54253 815 aaKnown RBP17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 DHX34Q14147 1143 aaKnown RBP17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 C8orf74Q6P047 294 aa17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 DRICH1Q6PGQ1 229 aaPredicted RBP17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 RBM23Q86U06 439 aaKnown RBP17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 MICALL1Q8N3F8 863 aa17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 EFHBQ8N7U6 833 aa17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 ACSF2Q96CM8 615 aaPredicted RBP17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 FCRL2Q96LA5 508 aaPredicted RBP17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 CSPG4P5Q96PW8 444 aa17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 FERMT1Q9BQL6 677 aa17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 LRRC3Q9BY71 257 aa17.31■□□□□ 0.36
SCAMP1-203ENST00000510030 LRRC19Q9H756 370 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms