RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 WDR45BQ5MNZ6 344 aa16.06■□□□□ 0.16
TPM3-219ENST00000509409 PEAR1Q5VY43 1037 aaPredicted RBP16.06■□□□□ 0.16
TPM3-219ENST00000509409 RRAGAQ7L523 313 aa16.06■□□□□ 0.16
TPM3-219ENST00000509409 BHLHA9Q7RTU4 235 aa16.06■□□□□ 0.16
TPM3-219ENST00000509409 TMPRSS6Q8IU80 811 aa16.06■□□□□ 0.16
TPM3-219ENST00000509409 ELOA2Q8IYF1 753 aaPredicted RBP16.06■□□□□ 0.16
TPM3-219ENST00000509409 UBR7Q8N806 425 aa16.06■□□□□ 0.16
TPM3-219ENST00000509409 SORCS1Q8WY21 1168 aa16.06■□□□□ 0.16
TPM3-219ENST00000509409 TFAP2BQ92481 460 aa16.06■□□□□ 0.16
TPM3-219ENST00000509409 GOLGA1Q92805 767 aa16.06■□□□□ 0.16
TPM3-219ENST00000509409 FOXJ1Q92949 421 aa16.06■□□□□ 0.16
TPM3-219ENST00000509409 SIPA1Q96FS4 1042 aa16.06■□□□□ 0.16
TPM3-219ENST00000509409 ZNF419Q96HQ0 510 aaPredicted RBP16.06■□□□□ 0.16
TPM3-219ENST00000509409 BICDL2A1A5D9 508 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 MEI4A8MW99 385 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 M0QYV0 167 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 RNF225M0QZC1 329 aaPredicted RBP16.05■□□□□ 0.16
TPM3-219ENST00000509409 BIN1O00499 593 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 ARHGAP33O14559 1287 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 PMM2O15305 246 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 MSI1O43347 362 aaKnown RBP16.05■□□□□ 0.16
TPM3-219ENST00000509409 OPHN1O60890 802 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 CALCAP01258 141 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 GNSP15586 552 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 BRD2P25440 801 aaKnown RBP16.05■□□□□ 0.16
TPM3-219ENST00000509409 MAOBP27338 520 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 STX17P56962 302 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 DAOAP59103 153 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 EIF4HQ15056 248 aaKnown RBP16.05■□□□□ 0.16
TPM3-219ENST00000509409 STILQ15468 1287 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 PLEKHG6Q3KR16 790 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 PMF1Q6P1K2 205 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 SERPINA13PQ6UXR4 307 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 METTL3Q86U44 580 aaKnown RBP16.05■□□□□ 0.16
TPM3-219ENST00000509409 FAM217AQ8IXS0 508 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 EHBP1Q8NDI1 1231 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 PRCCQ92733 491 aaPredicted RBP16.05■□□□□ 0.16
TPM3-219ENST00000509409 KAT5Q92993 513 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 TOE1Q96GM8 510 aaKnown RBP16.05■□□□□ 0.16
TPM3-219ENST00000509409 MKRN2Q9H000 416 aaKnown RBP16.05■□□□□ 0.16
TPM3-219ENST00000509409 ITM2CQ9NQX7 267 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 SUSD2Q9UGT4 822 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 PLA2G4CQ9UP65 541 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 CTNND2Q9UQB3 1225 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 NUP205Q92621 2012 aa16.05■□□□□ 0.16
TPM3-219ENST00000509409 PPP1R3GB7ZBB8 358 aa16.04■□□□□ 0.16
TPM3-219ENST00000509409 P4HA2O15460 535 aa16.04■□□□□ 0.16
TPM3-219ENST00000509409 OXTRP30559 389 aa16.04■□□□□ 0.16
TPM3-219ENST00000509409 ZNF445P59923 1031 aa16.04■□□□□ 0.16
TPM3-219ENST00000509409 PKDCCQ504Y2 493 aa16.04■□□□□ 0.16
TPM3-219ENST00000509409 FNDC3BQ53EP0 1204 aaKnown RBP16.04■□□□□ 0.16
TPM3-219ENST00000509409 ADGRF1Q5T601 910 aa16.04■□□□□ 0.16
TPM3-219ENST00000509409 UNC45BQ8IWX7 931 aa16.04■□□□□ 0.16
TPM3-219ENST00000509409 SCML4Q8N228 414 aa16.04■□□□□ 0.16
TPM3-219ENST00000509409 MINDY1Q8N5J2 469 aa16.04■□□□□ 0.16
TPM3-219ENST00000509409 RBBP8NLQ8NC74 664 aaPredicted RBP16.04■□□□□ 0.16
TPM3-219ENST00000509409 SLC35F5Q8WV83 523 aa16.04■□□□□ 0.16
TPM3-219ENST00000509409 IRGQQ8WZA9 623 aa16.04■□□□□ 0.16
TPM3-219ENST00000509409 GPR174Q9BXC1 333 aa16.04■□□□□ 0.16
TPM3-219ENST00000509409 MIS12Q9H081 205 aa16.04■□□□□ 0.16
TPM3-219ENST00000509409 MIR1-1HGQ9H1L0 117 aa16.04■□□□□ 0.16
TPM3-219ENST00000509409 CAPN10Q9HC96 672 aa16.04■□□□□ 0.16
TPM3-219ENST00000509409 WSB2Q9NYS7 404 aaPredicted RBP16.04■□□□□ 0.16
TPM3-219ENST00000509409 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.04■□□□□ 0.16
TPM3-219ENST00000509409 LATS1O95835 1130 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 GNA14O95837 355 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 LTFP02788 710 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 NCAM1P13591 858 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 HLA-EP13747 358 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 SPINK2P20155 84 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 PRKCHP24723 683 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 HOXD9P28356 352 aaPredicted RBP16.03■□□□□ 0.16
TPM3-219ENST00000509409 SLC11A2P49281 568 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 KCNH2Q12809 1159 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 ENPP2Q13822 863 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 TMEM215Q68D42 235 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 TTI2Q6NXR4 508 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 CHST9Q7L1S5 443 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 CACUL1Q86Y37 369 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 CREBRFQ8IUR6 639 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 ARHGEF19Q8IW93 802 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 OR2I1PQ8NGU4 316 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 WFIKKN2Q8TEU8 576 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 CYB5D2Q8WUJ1 264 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 HSFY1Q96LI6 401 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 NUP58Q9BVL2 599 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 SRRTQ9BXP5 876 aaKnown RBP16.03■□□□□ 0.16
TPM3-219ENST00000509409 ST7Q9NRC1 585 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 ABCB8Q9NUT2 735 aa16.03■□□□□ 0.16
TPM3-219ENST00000509409 USP36Q9P275 1121 aaKnown RBP16.03■□□□□ 0.16
TPM3-219ENST00000509409 GOLGA6L7A0A1B0GV03 622 aa16.02■□□□□ 0.16
TPM3-219ENST00000509409 KCNJ18B7U540 433 aa16.02■□□□□ 0.16
TPM3-219ENST00000509409 TBL1XO60907 577 aa16.02■□□□□ 0.16
TPM3-219ENST00000509409 GABBR2O75899 941 aa16.02■□□□□ 0.16
TPM3-219ENST00000509409 FBXO21O94952 628 aa16.02■□□□□ 0.16
TPM3-219ENST00000509409 AFPP02771 609 aaKnown RBP16.02■□□□□ 0.16
TPM3-219ENST00000509409 KRT5P13647 590 aa16.02■□□□□ 0.16
TPM3-219ENST00000509409 HLA-FP30511 346 aa16.02■□□□□ 0.16
TPM3-219ENST00000509409 RDXP35241 583 aaKnown RBP16.02■□□□□ 0.16
TPM3-219ENST00000509409 TPMTP51580 245 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms