RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 AGO1Q9UL18 857 aaKnown RBP20.84■□□□□ 0.93
USP53-203ENST00000507597 MOCS2O96007 188 aaPredicted RBP20.83■□□□□ 0.93
USP53-203ENST00000507597 ZXDBP98169 803 aa20.83■□□□□ 0.93
USP53-203ENST00000507597 MESDQ14696 234 aa20.83■□□□□ 0.93
USP53-203ENST00000507597 BOLA3Q53S33 107 aa20.83■□□□□ 0.93
USP53-203ENST00000507597 ADGRF1Q5T601 910 aa20.83■□□□□ 0.93
USP53-203ENST00000507597 TRNP1Q6NT89 227 aa20.83■□□□□ 0.93
USP53-203ENST00000507597 LRRC31Q6UY01 552 aa20.83■□□□□ 0.93
USP53-203ENST00000507597 Q6ZNB5 142 aa20.83■□□□□ 0.93
USP53-203ENST00000507597 ZNF662Q6ZS27 426 aa20.83■□□□□ 0.93
USP53-203ENST00000507597 SLFN11Q7Z7L1 901 aa20.83■□□□□ 0.93
USP53-203ENST00000507597 CCDC117Q8IWD4 279 aaPredicted RBP20.83■□□□□ 0.93
USP53-203ENST00000507597 UBALD2Q8IYN6 164 aa20.83■□□□□ 0.93
USP53-203ENST00000507597 CPXM2Q8N436 756 aa20.83■□□□□ 0.93
USP53-203ENST00000507597 DNASE1L2Q92874 299 aa20.83■□□□□ 0.93
USP53-203ENST00000507597 NTAN1Q96AB6 310 aa20.83■□□□□ 0.93
USP53-203ENST00000507597 ARHGEF38Q9NXL2 777 aa20.83■□□□□ 0.93
USP53-203ENST00000507597 PROSCO94903 275 aa20.82■□□□□ 0.92
USP53-203ENST00000507597 ADH1CP00326 375 aa20.82■□□□□ 0.92
USP53-203ENST00000507597 SRFP11831 508 aa20.82■□□□□ 0.92
USP53-203ENST00000507597 SSR1P43307 286 aaKnown RBP20.82■□□□□ 0.92
USP53-203ENST00000507597 PITX1P78337 314 aaPredicted RBP20.82■□□□□ 0.92
USP53-203ENST00000507597 GRM2Q14416 872 aa20.82■□□□□ 0.92
USP53-203ENST00000507597 PREPLQ4J6C6 727 aaPredicted RBP20.82■□□□□ 0.92
USP53-203ENST00000507597 EFHC2Q5JST6 749 aa20.82■□□□□ 0.92
USP53-203ENST00000507597 C1orf228Q6PIY5 440 aa20.82■□□□□ 0.92
USP53-203ENST00000507597 FAM131BQ86XD5 332 aa20.82■□□□□ 0.92
USP53-203ENST00000507597 PSTKQ8IV42 348 aaKnown RBP20.82■□□□□ 0.92
USP53-203ENST00000507597 SYCE1Q8N0S2 351 aa20.82■□□□□ 0.92
USP53-203ENST00000507597 ZNF557Q8N988 423 aaPredicted RBP20.82■□□□□ 0.92
USP53-203ENST00000507597 ADAMTS19Q8TE59 1207 aa20.82■□□□□ 0.92
USP53-203ENST00000507597 TRIM44Q96DX7 344 aaPredicted RBP20.82■□□□□ 0.92
USP53-203ENST00000507597 MSANTD3Q96H12 275 aa20.82■□□□□ 0.92
USP53-203ENST00000507597 C1orf74Q96LT6 269 aa20.82■□□□□ 0.92
USP53-203ENST00000507597 PLA2G2FQ9BZM2 168 aa20.82■□□□□ 0.92
USP53-203ENST00000507597 OSGEPQ9NPF4 335 aa20.82■□□□□ 0.92
USP53-203ENST00000507597 STOML2Q9UJZ1 356 aa20.82■□□□□ 0.92
USP53-203ENST00000507597 REXO2Q9Y3B8 237 aaKnown RBP20.82■□□□□ 0.92
USP53-203ENST00000507597 DOCK8Q8NF50 2099 aa20.81■□□□□ 0.92
USP53-203ENST00000507597 DLL1O00548 723 aa20.81■□□□□ 0.92
USP53-203ENST00000507597 ZNF135P52742 658 aaPredicted RBP20.81■□□□□ 0.92
USP53-203ENST00000507597 HDAC4P56524 1084 aa20.81■□□□□ 0.92
USP53-203ENST00000507597 RUNX3Q13761 415 aa20.81■□□□□ 0.92
USP53-203ENST00000507597 MPPE1Q53F39 396 aa20.81■□□□□ 0.92
USP53-203ENST00000507597 RNF135Q8IUD6 432 aa20.81■□□□□ 0.92
USP53-203ENST00000507597 BBS7Q8IWZ6 715 aa20.81■□□□□ 0.92
USP53-203ENST00000507597 ADGRG2Q8IZP9 1017 aa20.81■□□□□ 0.92
USP53-203ENST00000507597 RSAD2Q8WXG1 361 aa20.81■□□□□ 0.92
USP53-203ENST00000507597 RSPRY1Q96DX4 576 aa20.81■□□□□ 0.92
USP53-203ENST00000507597 UHRF1Q96T88 793 aaPredicted RBP20.81■□□□□ 0.92
USP53-203ENST00000507597 FAM83CQ9BQN1 747 aa20.81■□□□□ 0.92
USP53-203ENST00000507597 DONSONQ9NYP3 566 aa20.81■□□□□ 0.92
USP53-203ENST00000507597 USP18Q9UMW8 372 aa20.81■□□□□ 0.92
USP53-203ENST00000507597 DUSP12Q9UNI6 340 aa20.81■□□□□ 0.92
USP53-203ENST00000507597 GOLGA6L9A6NEM1 432 aa20.8■□□□□ 0.92
USP53-203ENST00000507597 F5H5T6 163 aa20.8■□□□□ 0.92
USP53-203ENST00000507597 KLKB1P03952 638 aa20.8■□□□□ 0.92
USP53-203ENST00000507597 ASGR2P07307 311 aa20.8■□□□□ 0.92
USP53-203ENST00000507597 GLULP15104 373 aa20.8■□□□□ 0.92
USP53-203ENST00000507597 ADRA1BP35368 520 aa20.8■□□□□ 0.92
USP53-203ENST00000507597 OGDHQ02218 1023 aa20.8■□□□□ 0.92
USP53-203ENST00000507597 GAD2Q05329 585 aa20.8■□□□□ 0.92
USP53-203ENST00000507597 ITPRIPL2Q3MIP1 535 aa20.8■□□□□ 0.92
USP53-203ENST00000507597 ODF2Q5BJF6 829 aa20.8■□□□□ 0.92
USP53-203ENST00000507597 RABGAP1LQ5R372 815 aa20.8■□□□□ 0.92
USP53-203ENST00000507597 ERMARDQ5T6L9 678 aa20.8■□□□□ 0.92
USP53-203ENST00000507597 TTC39BQ5VTQ0 682 aaPredicted RBP20.8■□□□□ 0.92
USP53-203ENST00000507597 CHSY1Q86X52 802 aa20.8■□□□□ 0.92
USP53-203ENST00000507597 ZNF830Q96NB3 372 aaPredicted RBP20.8■□□□□ 0.92
USP53-203ENST00000507597 LRRC3BQ96PB8 259 aa20.8■□□□□ 0.92
USP53-203ENST00000507597 RPP25Q9BUL9 199 aaKnown RBP20.8■□□□□ 0.92
USP53-203ENST00000507597 C8orf33Q9H7E9 229 aaPredicted RBP20.8■□□□□ 0.92
USP53-203ENST00000507597 SLC2A4RGQ9NR83 387 aa20.8■□□□□ 0.92
USP53-203ENST00000507597 SPHK2Q9NRA0 654 aa20.8■□□□□ 0.92
USP53-203ENST00000507597 PPP2R2CQ9Y2T4 447 aa20.8■□□□□ 0.92
USP53-203ENST00000507597 WNT6Q9Y6F9 365 aa20.8■□□□□ 0.92
USP53-203ENST00000507597 SPOPO43791 374 aa20.79■□□□□ 0.92
USP53-203ENST00000507597 GREM1O60565 184 aa20.79■□□□□ 0.92
USP53-203ENST00000507597 KRT7P08729 469 aa20.79■□□□□ 0.92
USP53-203ENST00000507597 TFE3P19532 575 aaPredicted RBP20.79■□□□□ 0.92
USP53-203ENST00000507597 HTR7P34969 479 aa20.79■□□□□ 0.92
USP53-203ENST00000507597 MLLT6P55198 1093 aaPredicted RBP20.79■□□□□ 0.92
USP53-203ENST00000507597 EML3Q32P44 896 aa20.79■□□□□ 0.92
USP53-203ENST00000507597 SH3PXD2AQ5TCZ1 1133 aa20.79■□□□□ 0.92
USP53-203ENST00000507597 OTUD1Q5VV17 481 aaPredicted RBP20.79■□□□□ 0.92
USP53-203ENST00000507597 C11orf63Q6NUN7 778 aa20.79■□□□□ 0.92
USP53-203ENST00000507597 DAAM2Q86T65 1068 aa20.79■□□□□ 0.92
USP53-203ENST00000507597 FAM217AQ8IXS0 508 aa20.79■□□□□ 0.92
USP53-203ENST00000507597 TMA16Q96EY4 203 aaKnown RBP20.79■□□□□ 0.92
USP53-203ENST00000507597 BTBD6Q96KE9 485 aa20.79■□□□□ 0.92
USP53-203ENST00000507597 ALS2CR12Q96Q35 445 aa20.79■□□□□ 0.92
USP53-203ENST00000507597 XPO6Q96QU8 1125 aaKnown RBP20.79■□□□□ 0.92
USP53-203ENST00000507597 TRIM7Q9C029 511 aa20.79■□□□□ 0.92
USP53-203ENST00000507597 SIK2Q9H0K1 926 aa20.79■□□□□ 0.92
USP53-203ENST00000507597 OSBPL2Q9H1P3 480 aa20.79■□□□□ 0.92
USP53-203ENST00000507597 RETREG1Q9H6L5 497 aa20.79■□□□□ 0.92
USP53-203ENST00000507597 ECT2Q9H8V3 914 aa20.79■□□□□ 0.92
USP53-203ENST00000507597 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.79■□□□□ 0.92
USP53-203ENST00000507597 TMEM110-MUSTN1A8MSY1 372 aa20.78■□□□□ 0.92
USP53-203ENST00000507597 LRCH4O75427 683 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms