RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 MDH1BQ5I0G3 518 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 MANEAQ5SRI9 462 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 SCARA3Q6AZY7 606 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 C1orf186Q6ZWK4 172 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 C14orf80Q86SX3 495 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 VASH2Q86V25 355 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 SPATS2Q86XZ4 545 aaKnown RBP7.61□□□□□ -1.19
VCAN-207ENST00000507162 NUP93Q8N1F7 819 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 SLC25A45Q8N413 288 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 CSGALNACT2Q8N6G5 542 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 PDZD8Q8NEN9 1154 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 WDR36Q8NI36 951 aaKnown RBP7.61□□□□□ -1.19
VCAN-207ENST00000507162 SSC4DQ8WTU2 575 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 C8orf48Q96LL4 319 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 CEP295NLQ96MC4 621 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 CRTAC1Q9NQ79 661 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 FBXL12Q9NXK8 326 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 MARK1Q9P0L2 795 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 ANAPC2Q9UJX6 822 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 FBXO10Q9UK96 956 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 CDH9Q9ULB4 789 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 PLA2G4CQ9UP65 541 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 SLC27A6Q9Y2P4 619 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 PCDHGA8Q9Y5G5 932 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 SDK2Q58EX2 2172 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 SPG11Q96JI7 2443 aa7.61□□□□□ -1.19
VCAN-207ENST00000507162 ADGRG4Q8IZF6 3080 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 CELSR1Q9NYQ6 3014 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 CPED1A4D0V7 1026 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 LRRC72A6NJI9 287 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 GABRDO14764 452 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 MTSS1O43312 755 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 TIMM44O43615 452 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 NOBOXO60393 691 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 RTN2O75298 545 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 CKMT1AP12532 417 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 TGM2P21980 687 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 KCNAB2Q13303 367 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 MORC3Q14149 939 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 ZRSR1Q15695 479 aaKnown RBP7.6□□□□□ -1.19
VCAN-207ENST00000507162 SOWAHAQ2M3V2 549 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 ADALQ6DHV7 355 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 ANKS1BQ7Z6G8 1248 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 CLEC14AQ86T13 490 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 TOP6BLQ8N6T0 577 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 SCAMP5Q8TAC9 235 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 IFI44Q8TCB0 444 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 CYB5D2Q8WUJ1 264 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 TNFRSF25Q93038 417 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 P2RY11Q96G91 374 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 PCED1BQ96HM7 432 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 KLF16Q9BXK1 252 aaPredicted RBP7.6□□□□□ -1.19
VCAN-207ENST00000507162 AGXT2Q9BYV1 514 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 NEUROG2Q9H2A3 272 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 ADNPQ9H2P0 1102 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 CYLDQ9NQC7 956 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 PRSS16Q9NQE7 514 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 UCKL1Q9NWZ5 548 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 SEPT10Q9P0V9 454 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 ORC3Q9UBD5 711 aaPredicted RBP7.6□□□□□ -1.19
VCAN-207ENST00000507162 R3HCC1Q9Y3T6 440 aaKnown RBP7.6□□□□□ -1.19
VCAN-207ENST00000507162 PCDHGA4Q9Y5G9 962 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 ENTPD2Q9Y5L3 495 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 HIVEP1P15822 2718 aa7.6□□□□□ -1.19
VCAN-207ENST00000507162 TDRD6O60522 2096 aaKnown RBP7.59□□□□□ -1.19
VCAN-207ENST00000507162 SVILO95425 2214 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 NPHP3-ACAD11A0A0J9YXS1 232 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 H0YCG3 227 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 CLDN5O00501 218 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 GREM1O60565 184 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 RTN3O95197 1032 aaPredicted RBP7.59□□□□□ -1.19
VCAN-207ENST00000507162 GP1BAP07359 652 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 DGKAP23743 735 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 GRNP28799 593 aaKnown RBP7.59□□□□□ -1.19
VCAN-207ENST00000507162 CACNA2D1P54289 1103 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 OXCT1P55809 520 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 EVCP57679 992 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 ZBTB16Q05516 673 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 GOLGA8FQ08AF8 430 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 GOLGA8DPQ0D2H9 430 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 AAMPQ13685 434 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 KCNJ12Q14500 433 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 KRTAP21-3Q3LHN1 58 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 TMEM215Q68D42 235 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 CRTC1Q6UUV9 634 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 RBM44Q6ZP01 1051 aaKnown RBP7.59□□□□□ -1.19
VCAN-207ENST00000507162 FBXL16Q8N461 479 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 MFSD2AQ8NA29 543 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 OR4C6Q8NH72 309 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 MYCBPAPQ8TBZ2 947 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 SNX29Q8TEQ0 813 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 CACTINQ8WUQ7 758 aaKnown RBP7.59□□□□□ -1.19
VCAN-207ENST00000507162 HTR3CQ8WXA8 447 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 OVCA2Q8WZ82 227 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 MIB2Q96AX9 1013 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 GRAMD1AQ96CP6 724 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 PIWIL1Q96J94 861 aaKnown RBP7.59□□□□□ -1.19
VCAN-207ENST00000507162 FAM84AQ96KN4 292 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 APOLD1Q96LR9 279 aa7.59□□□□□ -1.19
VCAN-207ENST00000507162 DUSP9Q99956 384 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms