RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 XPO4Q9C0E2 1151 aaKnown RBP20.09■□□□□ 0.81
LMNA-221ENST00000506981 TTYH3Q9C0H2 523 aa20.09■□□□□ 0.81
LMNA-221ENST00000506981 NUCKS1Q9H1E3 243 aaKnown RBP20.09■□□□□ 0.81
LMNA-221ENST00000506981 FAM86C1Q9NVL1 165 aa20.09■□□□□ 0.81
LMNA-221ENST00000506981 STOML2Q9UJZ1 356 aa20.09■□□□□ 0.81
LMNA-221ENST00000506981 SLC8A2Q9UPR5 921 aa20.09■□□□□ 0.81
LMNA-221ENST00000506981 CHURC1-FNTBB4DL54 471 aa20.08■□□□□ 0.81
LMNA-221ENST00000506981 TSPAN3O60637 253 aa20.08■□□□□ 0.81
LMNA-221ENST00000506981 PENKP01210 267 aaPredicted RBP20.08■□□□□ 0.81
LMNA-221ENST00000506981 IGLV3-25P01717 112 aa20.08■□□□□ 0.81
LMNA-221ENST00000506981 CALB1P05937 261 aa20.08■□□□□ 0.81
LMNA-221ENST00000506981 UNGP13051 313 aaPredicted RBP20.08■□□□□ 0.81
LMNA-221ENST00000506981 PBX1P40424 430 aa20.08■□□□□ 0.81
LMNA-221ENST00000506981 TNFRSF4P43489 277 aa20.08■□□□□ 0.81
LMNA-221ENST00000506981 SULT1E1P49888 294 aa20.08■□□□□ 0.81
LMNA-221ENST00000506981 C10orf76Q5T2E6 689 aa20.08■□□□□ 0.81
LMNA-221ENST00000506981 FYB2Q5VWT5 728 aa20.08■□□□□ 0.81
LMNA-221ENST00000506981 PPP1R2P3Q6NXS1 205 aa20.08■□□□□ 0.81
LMNA-221ENST00000506981 SND1Q7KZF4 910 aaKnown RBP eCLIP20.08■□□□□ 0.818e-10■□□□□ 10.9
LMNA-221ENST00000506981 IRF2BP2Q7Z5L9 587 aa20.08■□□□□ 0.81
LMNA-221ENST00000506981 SLC30A5Q8TAD4 765 aa20.08■□□□□ 0.81
LMNA-221ENST00000506981 TMA16Q96EY4 203 aaKnown RBP20.08■□□□□ 0.81
LMNA-221ENST00000506981 SLC39A13Q96H72 371 aa20.08■□□□□ 0.81
LMNA-221ENST00000506981 PCDHB18PQ96TA0 734 aa20.08■□□□□ 0.81
LMNA-221ENST00000506981 IRX2Q9BZI1 471 aaPredicted RBP20.08■□□□□ 0.81
LMNA-221ENST00000506981 METTL5Q9NRN9 209 aaKnown RBP20.08■□□□□ 0.81
LMNA-221ENST00000506981 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.08■□□□□ 0.81
LMNA-221ENST00000506981 ADAM22Q9P0K1 906 aa20.08■□□□□ 0.81
LMNA-221ENST00000506981 A0A1W2PQJ5 194 aa20.07■□□□□ 0.8
LMNA-221ENST00000506981 K7EQS6 105 aa20.07■□□□□ 0.8
LMNA-221ENST00000506981 M0QYT0 321 aa20.07■□□□□ 0.8
LMNA-221ENST00000506981 ABCB4P21439 1286 aa20.07■□□□□ 0.8
LMNA-221ENST00000506981 CCR1P32246 355 aa20.07■□□□□ 0.8
LMNA-221ENST00000506981 NRLP54845 237 aa20.07■□□□□ 0.8
LMNA-221ENST00000506981 PITX1P78337 314 aaPredicted RBP20.07■□□□□ 0.8
LMNA-221ENST00000506981 MRPS21P82921 87 aaKnown RBP20.07■□□□□ 0.8
LMNA-221ENST00000506981 KLHL30Q0D2K2 578 aa20.07■□□□□ 0.8
LMNA-221ENST00000506981 NME3Q13232 169 aa20.07■□□□□ 0.8
LMNA-221ENST00000506981 MTA1Q13330 715 aa20.07■□□□□ 0.8
LMNA-221ENST00000506981 C2orf27AQ580R0 203 aa20.07■□□□□ 0.8
LMNA-221ENST00000506981 ZC3H12AQ5D1E8 599 aaKnown RBP20.07■□□□□ 0.8
LMNA-221ENST00000506981 TSSK4Q6SA08 328 aa20.07■□□□□ 0.8
LMNA-221ENST00000506981 MAML2Q8IZL2 1156 aaPredicted RBP20.07■□□□□ 0.8
LMNA-221ENST00000506981 PHTF2Q8N3S3 785 aa20.07■□□□□ 0.8
LMNA-221ENST00000506981 USP33Q8TEY7 942 aa20.07■□□□□ 0.8
LMNA-221ENST00000506981 EZH1Q92800 747 aaPredicted RBP20.07■□□□□ 0.8
LMNA-221ENST00000506981 BTN2A3PQ96KV6 586 aa20.07■□□□□ 0.8
LMNA-221ENST00000506981 FAM126AQ9BYI3 521 aaPredicted RBP20.07■□□□□ 0.8
LMNA-221ENST00000506981 TMEM51Q9NW97 253 aa20.07■□□□□ 0.8
LMNA-221ENST00000506981 AIPL1Q9NZN9 384 aa20.07■□□□□ 0.8
LMNA-221ENST00000506981 PAXBP1Q9Y5B6 917 aa20.07■□□□□ 0.8
LMNA-221ENST00000506981 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.07■□□□□ 0.8
LMNA-221ENST00000506981 PAPSS2O95340 614 aaPredicted RBP20.06■□□□□ 0.8
LMNA-221ENST00000506981 TIE1P35590 1138 aa20.06■□□□□ 0.8
LMNA-221ENST00000506981 HSF5Q4G112 596 aaPredicted RBP20.06■□□□□ 0.8
LMNA-221ENST00000506981 PKN3Q6P5Z2 889 aa20.06■□□□□ 0.8
LMNA-221ENST00000506981 TRMT11Q7Z4G4 463 aaKnown RBP20.06■□□□□ 0.8
LMNA-221ENST00000506981 CHSY1Q86X52 802 aa20.06■□□□□ 0.8
LMNA-221ENST00000506981 PHF13Q86YI8 300 aaPredicted RBP20.06■□□□□ 0.8
LMNA-221ENST00000506981 CCDC117Q8IWD4 279 aaPredicted RBP20.06■□□□□ 0.8
LMNA-221ENST00000506981 HJURPQ8NCD3 748 aaPredicted RBP20.06■□□□□ 0.8
LMNA-221ENST00000506981 CPLX3Q8WVH0 158 aa20.06■□□□□ 0.8
LMNA-221ENST00000506981 SLC2A11Q9BYW1 496 aa20.06■□□□□ 0.8
LMNA-221ENST00000506981 EML5Q05BV3 1969 aa20.06■□□□□ 0.8
LMNA-221ENST00000506981 ITIH6Q6UXX5 1313 aa20.05■□□□□ 0.8
LMNA-221ENST00000506981 A0A0A0MRY4 1105 aa20.05■□□□□ 0.8
LMNA-221ENST00000506981 F9P00740 461 aa20.05■□□□□ 0.8
LMNA-221ENST00000506981 PLA2G5P39877 138 aa20.05■□□□□ 0.8
LMNA-221ENST00000506981 PRKCIP41743 596 aa20.05■□□□□ 0.8
LMNA-221ENST00000506981 ZBED6P86452 979 aa20.05■□□□□ 0.8
LMNA-221ENST00000506981 DEUP1Q05D60 604 aa20.05■□□□□ 0.8
LMNA-221ENST00000506981 MESP2Q0VG99 397 aa20.05■□□□□ 0.8
LMNA-221ENST00000506981 TDRD12Q587J7 1177 aaKnown RBP20.05■□□□□ 0.8
LMNA-221ENST00000506981 FAM133BQ5BKY9 247 aaKnown RBP20.05■□□□□ 0.8
LMNA-221ENST00000506981 RFWD3Q6PCD5 774 aa20.05■□□□□ 0.8
LMNA-221ENST00000506981 ARCQ7LC44 396 aa20.05■□□□□ 0.8
LMNA-221ENST00000506981 ZNF557Q8N988 423 aaPredicted RBP20.05■□□□□ 0.8
LMNA-221ENST00000506981 NPY6RQ99463 290 aa20.05■□□□□ 0.8
LMNA-221ENST00000506981 SELENOOQ9BVL4 669 aa20.05■□□□□ 0.8
LMNA-221ENST00000506981 HAUS4Q9H6D7 363 aa20.05■□□□□ 0.8
LMNA-221ENST00000506981 ZSCAN32Q9NX65 697 aa20.05■□□□□ 0.8
LMNA-221ENST00000506981 LUC7L2Q9Y383 392 aaKnown RBP20.05■□□□□ 0.8
LMNA-221ENST00000506981 WDFY4Q6ZS81 3184 aa20.04■□□□□ 0.8
LMNA-221ENST00000506981 GOLGA6L7A0A1B0GV03 622 aa20.04■□□□□ 0.8
LMNA-221ENST00000506981 TRIM24O15164 1050 aa20.04■□□□□ 0.8
LMNA-221ENST00000506981 TBL1XO60907 577 aa20.04■□□□□ 0.8
LMNA-221ENST00000506981 TPM1P09493 284 aa20.04■□□□□ 0.8
LMNA-221ENST00000506981 HOXD9P28356 352 aaPredicted RBP20.04■□□□□ 0.8
LMNA-221ENST00000506981 SLC6A4P31645 630 aa20.04■□□□□ 0.8
LMNA-221ENST00000506981 FLT3P36888 993 aa20.04■□□□□ 0.8
LMNA-221ENST00000506981 C1QBPQ07021 282 aaKnown RBP20.04■□□□□ 0.8
LMNA-221ENST00000506981 TRIM14Q14142 442 aa20.04■□□□□ 0.8
LMNA-221ENST00000506981 DMC1Q14565 340 aa20.04■□□□□ 0.8
LMNA-221ENST00000506981 E2F5Q15329 346 aa20.04■□□□□ 0.8
LMNA-221ENST00000506981 SLC25A52Q3SY17 297 aa20.04■□□□□ 0.8
LMNA-221ENST00000506981 MPP7Q5T2T1 576 aa20.04■□□□□ 0.8
LMNA-221ENST00000506981 PIK3R6Q5UE93 754 aa20.04■□□□□ 0.8
LMNA-221ENST00000506981 NADSYN1Q6IA69 706 aa20.04■□□□□ 0.8
LMNA-221ENST00000506981 SYT13Q7L8C5 426 aa20.04■□□□□ 0.8
LMNA-221ENST00000506981 ANKS1BQ7Z6G8 1248 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms