RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 PCDH20Q8N6Y1 951 aaKnown RBP9.89□□□□□ -0.83
PHF3-208ENST00000506783 PDCD6IPQ8WUM4 868 aaKnown RBP9.89□□□□□ -0.83
PHF3-208ENST00000506783 C10orf82Q8WW14 230 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 EVPLQ92817 2033 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 GRAMD1AQ96CP6 724 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 DHX33Q9H6R0 707 aaKnown RBP9.89□□□□□ -0.83
PHF3-208ENST00000506783 CDHR5Q9HBB8 845 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 SIGLEC16A6NMB1 481 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 TNPO2O14787 897 aaKnown RBP9.89□□□□□ -0.83
PHF3-208ENST00000506783 ASPAP45381 313 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 SLC8A3P57103 927 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 MRPS22P82650 360 aaKnown RBP9.89□□□□□ -0.83
PHF3-208ENST00000506783 CTBP1Q13363 440 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 FKBP1CQ5VVH2 108 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 B3GNT9Q6UX72 402 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 SYDE1Q6ZW31 735 aaPredicted RBP9.89□□□□□ -0.83
PHF3-208ENST00000506783 DNAJB3Q8WWF6 145 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 TEPSINQ96N21 525 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 APBA2Q99767 749 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 TRIM8Q9BZR9 551 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 VPS33BQ9H267 617 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 DDIT4Q9NX09 232 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 DONSONQ9NYP3 566 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 SIX4Q9UIU6 781 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 C2CD2Q9Y426 696 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.89□□□□□ -0.83
PHF3-208ENST00000506783 APOC4-APOC2K7ER74 178 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 PDHXO00330 501 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 APOC2P02655 101 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 CD1EP15812 388 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 MYBPC2Q14324 1141 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 TTC39BQ5VTQ0 682 aaPredicted RBP9.89□□□□□ -0.83
PHF3-208ENST00000506783 IER5Q5VY09 327 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 ATG16L1Q676U5 607 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 FOXR2Q6PJQ5 311 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 CATSPERGQ6ZRH7 1159 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 DNAJC1Q96KC8 554 aaKnown RBP9.89□□□□□ -0.83
PHF3-208ENST00000506783 KCNK16Q96T55 309 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 ACSS3Q9H6R3 686 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 XAB2Q9HCS7 855 aaKnown RBP9.89□□□□□ -0.83
PHF3-208ENST00000506783 FAM8A1Q9UBU6 413 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 TLK1Q9UKI8 766 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 SHOC2Q9UQ13 582 aa9.89□□□□□ -0.83
PHF3-208ENST00000506783 NRAPQ86VF7 1730 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 SHANK3Q9BYB0 1731 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 HOXC6P09630 235 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 HNRNPLP14866 589 aaKnown RBP eCLIP9.88□□□□□ -0.83
PHF3-208ENST00000506783 EFNA5P52803 228 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 NAGLUP54802 743 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 SLC12A2P55011 1212 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 YWHAZP63104 245 aaKnown RBP9.88□□□□□ -0.83
PHF3-208ENST00000506783 PRPSAP1Q14558 356 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 OASLQ15646 514 aaKnown RBP9.88□□□□□ -0.83
PHF3-208ENST00000506783 PITRM1Q5JRX3 1037 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 PAOXQ6QHF9 649 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 C4orf50Q6ZRC1 276 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 TFAP2DQ7Z6R9 452 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 RNF157Q96PX1 679 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 TBCBQ99426 244 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 CNPY3Q9BT09 278 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 PRDM12Q9H4Q4 367 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 PPM1HQ9ULR3 514 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 STARD13Q9Y3M8 1113 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 A0A1B0GVG6 124 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 NEMP2A6NFY4 417 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 H3BRB1 525 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 MYL3P08590 195 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 USP17L7P0C7H9 530 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 IRF9Q00978 393 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 ART3Q13508 389 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 MXD4Q14582 209 aaPredicted RBP9.88□□□□□ -0.83
PHF3-208ENST00000506783 USP10Q14694 798 aaKnown RBP9.88□□□□□ -0.83
PHF3-208ENST00000506783 NOMO1Q15155 1222 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 SLC10A6Q3KNW5 377 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 NOMO2Q5JPE7 1267 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 PPM1LQ5SGD2 360 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 METTL7BQ6UX53 244 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 ARHGAP24Q8N264 748 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 SNRNP27Q8WVK2 155 aaKnown RBP9.88□□□□□ -0.83
PHF3-208ENST00000506783 PABPC5Q96DU9 382 aaKnown RBP9.88□□□□□ -0.83
PHF3-208ENST00000506783 FGD4Q96M96 766 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 NDNQ99608 321 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 TUT1Q9H6E5 874 aaKnown RBP9.88□□□□□ -0.83
PHF3-208ENST00000506783 SARS2Q9NP81 518 aaKnown RBP9.88□□□□□ -0.83
PHF3-208ENST00000506783 SLC5A4Q9NY91 659 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 VCANP13611 3396 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 TTC3P53804 2025 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 BRWD3Q6RI45 1802 aa9.88□□□□□ -0.83
PHF3-208ENST00000506783 NCF1BA6NI72 391 aaPredicted RBP9.87□□□□□ -0.83
PHF3-208ENST00000506783 NCF1CA8MVU1 366 aaPredicted RBP9.87□□□□□ -0.83
PHF3-208ENST00000506783 RNF103O00237 685 aa9.87□□□□□ -0.83
PHF3-208ENST00000506783 PSMG1O95456 288 aa9.87□□□□□ -0.83
PHF3-208ENST00000506783 MT-ND1P03886 318 aa9.87□□□□□ -0.83
PHF3-208ENST00000506783 NCF1P14598 390 aaPredicted RBP9.87□□□□□ -0.83
PHF3-208ENST00000506783 HOXA7P31268 230 aaPredicted RBP9.87□□□□□ -0.83
PHF3-208ENST00000506783 HTRA3P83110 453 aa9.87□□□□□ -0.83
PHF3-208ENST00000506783 CDK16Q00536 496 aa9.87□□□□□ -0.83
PHF3-208ENST00000506783 DEUP1Q05D60 604 aa9.87□□□□□ -0.83
PHF3-208ENST00000506783 TTLL4Q14679 1199 aa9.87□□□□□ -0.83
PHF3-208ENST00000506783 CRYMQ14894 314 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms