RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 KRT83P78385 493 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 RUNX3Q13761 415 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 ACAP1Q15027 740 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 CDO1Q16878 200 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 TRIM68Q6AZZ1 485 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 SND1Q7KZF4 910 aaKnown RBP eCLIP13.34□□□□□ -0.27
TCOF1-210ENST00000506767 RHOT2Q8IXI1 618 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 UBALD2Q8IYN6 164 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 CPXM2Q8N436 756 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 ARFGAP1Q8N6T3 406 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 NIPA2Q8N8Q9 360 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 ACRBPQ8NEB7 543 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 ZNF564Q8TBZ8 553 aaPredicted RBP13.34□□□□□ -0.27
TCOF1-210ENST00000506767 FAM172AQ8WUF8 416 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 RFFLQ8WZ73 363 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 DNASE1L2Q92874 299 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 BTN2A3PQ96KV6 586 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 PPP1R9BQ96SB3 815 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 EBF3Q9H4W6 596 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 WDCPQ9H6R7 721 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 OSGEPQ9NPF4 335 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 LUC7LQ9NQ29 371 aaKnown RBP13.34□□□□□ -0.27
TCOF1-210ENST00000506767 ANLNQ9NQW6 1124 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 COX16Q9P0S2 106 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 CTTNBP2NLQ9P2B4 639 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 MUTYHQ9UIF7 546 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 ANAPC7Q9UJX3 599 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 TFR2Q9UP52 801 aa13.34□□□□□ -0.27
TCOF1-210ENST00000506767 TICRRQ7Z2Z1 1910 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 A0A0A6YYK5 440 aaPredicted RBP13.33□□□□□ -0.28
TCOF1-210ENST00000506767 OTOL1A6NHN0 477 aaPredicted RBP13.33□□□□□ -0.28
TCOF1-210ENST00000506767 ACSL4O60488 711 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 IPO7O95373 1038 aaKnown RBP13.33□□□□□ -0.28
TCOF1-210ENST00000506767 NFATC1O95644 943 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 APOEP02649 317 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 ARSAP15289 507 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 PSMA2P25787 234 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 CHKAP35790 457 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 VAV2P52735 878 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 HADHBP55084 474 aaKnown RBP13.33□□□□□ -0.28
TCOF1-210ENST00000506767 MLLT6P55198 1093 aaPredicted RBP13.33□□□□□ -0.28
TCOF1-210ENST00000506767 PFKPQ01813 784 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 TNK2Q07912 1038 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 CCDC173Q0VFZ6 552 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 MTA1Q13330 715 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 FAM133BQ5BKY9 247 aaKnown RBP13.33□□□□□ -0.28
TCOF1-210ENST00000506767 ADGRF1Q5T601 910 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 NADSYN1Q6IA69 706 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 RHBDF2Q6PJF5 856 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 ATP6V0D2Q8N8Y2 350 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 ATP2A3Q93084 1043 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 BTBD6Q96KE9 485 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 IRX2Q9BZI1 471 aaPredicted RBP13.33□□□□□ -0.28
TCOF1-210ENST00000506767 TKTL2Q9H0I9 626 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 ECT2Q9H8V3 914 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 GTSE1Q9NYZ3 720 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 IP6K2Q9UHH9 426 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 XPO7Q9UIA9 1087 aaKnown RBP13.33□□□□□ -0.28
TCOF1-210ENST00000506767 PAXBP1Q9Y5B6 917 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 ADGRG1Q9Y653 693 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 COL4A3Q01955 1670 aa13.33□□□□□ -0.28
TCOF1-210ENST00000506767 BTNL10A8MVZ5 291 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 MYO1FO00160 1098 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 CYP17A1P05093 508 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 SLC6A4P31645 630 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 ADRA1BP35368 520 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 ARHGAP25P42331 645 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 SLC11A2P49281 568 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 ZXDAP98168 799 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 PIGHQ14442 188 aaPredicted RBP13.32□□□□□ -0.28
TCOF1-210ENST00000506767 DHCR24Q15392 516 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 GAB4Q2WGN9 574 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 ITPRIPL2Q3MIP1 535 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 ARTNQ5T4W7 220 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 IER5LQ5T953 404 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 FAM131BQ86XD5 332 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 RNF34Q969K3 372 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 NTAN1Q96AB6 310 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 P2RY11Q96G91 374 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 HAPLN3Q96S86 360 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 PRMT1Q99873 361 aaKnown RBP13.32□□□□□ -0.28
TCOF1-210ENST00000506767 NCAPGQ9BPX3 1015 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 DESI2Q9BSY9 194 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 C1QTNF1Q9BXJ1 281 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 LACRTQ9GZZ8 138 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 KCNF1Q9H3M0 494 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 SPHK2Q9NRA0 654 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 MARK1Q9P0L2 795 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 WNT16Q9UBV4 365 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 SLC12A6Q9UHW9 1150 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 LCMT1Q9UIC8 334 aa13.32□□□□□ -0.28
TCOF1-210ENST00000506767 GOLGA6L7A0A1B0GV03 622 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 SHISA7A6NL88 538 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 NRDCO43847 1150 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 LRCH4O75427 683 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 PAGE1O75459 146 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 RNF8O76064 485 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 PROSCO94903 275 aa13.31□□□□□ -0.28
TCOF1-210ENST00000506767 MOCS2O96007 188 aaPredicted RBP13.31□□□□□ -0.28
TCOF1-210ENST00000506767 GLULP15104 373 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms