RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 FAM170AA1A519 330 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 E5RJQ4 531 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 PTGER3P43115 390 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 CREB5Q02930 508 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 CETN1Q12798 172 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 TAF5Q15542 800 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 FAM133BQ5BKY9 247 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 RFWD3Q6PCD5 774 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 ARMCX6Q7L4S7 300 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 TMEFF1Q8IYR6 380 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 CCDC26Q8TAB7 109 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 ADAM32Q8TC27 787 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 DQX1Q8TE96 717 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 IPO4Q8TEX9 1081 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 RNF139Q8WU17 664 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 IRGQQ8WZA9 623 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 SHC3Q92529 594 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 FCRL2Q96LA5 508 aaPredicted RBP17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 HSFY1Q96LI6 401 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 NUP62CLQ9H1M0 184 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 POLMQ9NP87 494 aaPredicted RBP17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 OLA1Q9NTK5 396 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 TMEM74BQ9NUR3 256 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 BCCIPQ9P287 314 aaKnown RBP eCLIP17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 XPO7Q9UIA9 1087 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 STOML2Q9UJZ1 356 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 ZNF510Q9Y2H8 683 aa17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 HBS1LQ9Y450 684 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 ATXN2Q99700 1313 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-215ENST00000506161 THAP12O43422 761 aa17.44■□□□□ 0.38
PDLIM7-215ENST00000506161 HLA-FP30511 346 aa17.44■□□□□ 0.38
PDLIM7-215ENST00000506161 GNA15P30679 374 aa17.44■□□□□ 0.38
PDLIM7-215ENST00000506161 CHKAP35790 457 aa17.44■□□□□ 0.38
PDLIM7-215ENST00000506161 MTIF2P46199 727 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-215ENST00000506161 ENPP2Q13822 863 aa17.44■□□□□ 0.38
PDLIM7-215ENST00000506161 STILQ15468 1287 aa17.44■□□□□ 0.38
PDLIM7-215ENST00000506161 USP39Q53GS9 565 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-215ENST00000506161 GBP6Q6ZN66 633 aa17.44■□□□□ 0.38
PDLIM7-215ENST00000506161 PASD1Q8IV76 773 aa17.44■□□□□ 0.38
PDLIM7-215ENST00000506161 CHPFQ8IZ52 775 aa17.44■□□□□ 0.38
PDLIM7-215ENST00000506161 PRICKLE1Q96MT3 831 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-215ENST00000506161 ST7Q9NRC1 585 aa17.44■□□□□ 0.38
PDLIM7-215ENST00000506161 APEX2Q9UBZ4 518 aa17.44■□□□□ 0.38
PDLIM7-215ENST00000506161 STON1Q9Y6Q2 735 aa17.44■□□□□ 0.38
PDLIM7-215ENST00000506161 TM4SF5O14894 197 aa17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 FGFR1OPO95684 399 aaKnown RBP17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 PROS1P07225 676 aa17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 PRKCHP24723 683 aa17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 DHPSP49366 369 aaPredicted RBP17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 ELF2Q15723 593 aa17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 MAN2A1Q16706 1144 aa17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 EXOC3L4Q17RC7 722 aa17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 RNF43Q68DV7 783 aa17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 TAC4Q86UU9 113 aa17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 PGBD3Q8N328 593 aa17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 KCNV2Q8TDN2 545 aa17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 DDI1Q8WTU0 396 aa17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 CPXM1Q96SM3 734 aa17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 THAP9Q9H5L6 903 aa17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 PLCB1Q9NQ66 1216 aa17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 FSCN3Q9NQT6 498 aa17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 THAP10Q9P2Z0 257 aaPredicted RBP17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 DNAJC12Q9UKB3 198 aa17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 PCDHGA5Q9Y5G8 931 aa17.43■□□□□ 0.38
PDLIM7-215ENST00000506161 LAMA1P25391 3075 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 IGHV1OR15-9A0A0B4J2B8 117 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 GTPBP10A4D1E9 387 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 FOXN3O00409 490 aaPredicted RBP17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 ALDH1A2O94788 518 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 RHOBTB1O94844 696 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 CAVIN2O95810 425 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 NCAM1P13591 858 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 HLA-EP13747 358 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 HOXB3P14651 431 aaPredicted RBP17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 CLCN1P35523 988 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 USP8P40818 1118 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 TBX4P57082 545 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 PDCLQ13371 301 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 ZNF234Q14588 700 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 FUT11Q495W5 492 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 AASDHQ4L235 1098 aaPredicted RBP17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 SLC41A1Q8IVJ1 513 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 ZNF366Q8N895 744 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 SLC39A13Q96H72 371 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 LMLNQ96KR4 655 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 MRGPRX1Q96LB2 322 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 ADAM33Q9BZ11 813 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 MKRN2Q9H000 416 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 CYP8B1Q9UNU6 501 aa17.42■□□□□ 0.38
PDLIM7-215ENST00000506161 TP53BP1Q12888 1972 aaPredicted RBP17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 LNP1A1A4G5 178 aa17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 ACSL4O60488 711 aa17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 CD70P32970 193 aa17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 HARS2P49590 506 aaKnown RBP17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 LIMK1P53667 647 aa17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 EIF4EBP2Q13542 120 aaPredicted RBP17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 VWA3BQ502W6 1294 aa17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 ADGRF1Q5T601 910 aa17.41■□□□□ 0.38
PDLIM7-215ENST00000506161 PIK3R6Q5UE93 754 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms