RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 SUMO4Q6EEV6 95 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 RD3Q7Z3Z2 195 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 ADGRG3Q86Y34 549 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 MYLK4Q86YV6 388 aaPredicted RBP6.59□□□□□ -1.35
NIPBL-205ENST00000505998 P3H2Q8IVL5 708 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 TERB1Q8NA31 727 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 ZNF527Q8NB42 609 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 FAM98AQ8NCA5 519 aaKnown RBP6.59□□□□□ -1.35
NIPBL-205ENST00000505998 MORC4Q8TE76 937 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 IPO4Q8TEX9 1081 aaKnown RBP6.59□□□□□ -1.35
NIPBL-205ENST00000505998 NELL1Q92832 810 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 DAZAP1Q96EP5 407 aaKnown RBP6.59□□□□□ -1.35
NIPBL-205ENST00000505998 MACROD1Q9BQ69 325 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 CIPCQ9C0C6 399 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 R3HDMLQ9H3Y0 253 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 ADGRB1O14514 1584 aa6.59□□□□□ -1.35
NIPBL-205ENST00000505998 SCAF11Q99590 1463 aaKnown RBP6.59□□□□□ -1.36
NIPBL-205ENST00000505998 A0A087WV62 115 aa6.58□□□□□ -1.36
NIPBL-205ENST00000505998 OR2W5A6NFC9 320 aa6.58□□□□□ -1.36
NIPBL-205ENST00000505998 TARM1B6A8C7 271 aa6.58□□□□□ -1.36
NIPBL-205ENST00000505998 F5H423 210 aaPredicted RBP6.58□□□□□ -1.36
NIPBL-205ENST00000505998 PROP1O75360 226 aa6.58□□□□□ -1.36
NIPBL-205ENST00000505998 C1QL1O75973 258 aa6.58□□□□□ -1.36
NIPBL-205ENST00000505998 ADRA1DP25100 572 aa6.58□□□□□ -1.36
NIPBL-205ENST00000505998 MCM5P33992 734 aa6.58□□□□□ -1.36
NIPBL-205ENST00000505998 DIO1P49895 249 aa6.58□□□□□ -1.36
NIPBL-205ENST00000505998 HOXA4Q00056 320 aaPredicted RBP6.58□□□□□ -1.36
NIPBL-205ENST00000505998 LMAN2Q12907 356 aa6.58□□□□□ -1.36
NIPBL-205ENST00000505998 ACOX1Q15067 660 aa6.58□□□□□ -1.36
NIPBL-205ENST00000505998 RNASE12Q5GAN4 147 aaKnown RBP6.58□□□□□ -1.36
NIPBL-205ENST00000505998 PGBD2Q6P3X8 592 aa6.58□□□□□ -1.36
NIPBL-205ENST00000505998 KIRREL2Q6UWL6 708 aa6.58□□□□□ -1.36
NIPBL-205ENST00000505998 TRIM72Q6ZMU5 477 aa6.58□□□□□ -1.36
NIPBL-205ENST00000505998 RASGRP3Q8IV61 690 aa6.58□□□□□ -1.36
NIPBL-205ENST00000505998 REPS1Q96D71 796 aa6.58□□□□□ -1.36
NIPBL-205ENST00000505998 CRB3Q9BUF7 120 aa6.58□□□□□ -1.36
NIPBL-205ENST00000505998 CA14Q9ULX7 337 aa6.58□□□□□ -1.36
NIPBL-205ENST00000505998 RPGRIP1LQ68CZ1 1315 aa6.57□□□□□ -1.36
NIPBL-205ENST00000505998 ARHGEF28Q8N1W1 1705 aaKnown RBP6.57□□□□□ -1.36
NIPBL-205ENST00000505998 GOLGA6L3A6NEY3 463 aa6.57□□□□□ -1.36
NIPBL-205ENST00000505998 LRRC3CA6NJW4 275 aa6.57□□□□□ -1.36
NIPBL-205ENST00000505998 PIP5K1BO14986 540 aa6.57□□□□□ -1.36
NIPBL-205ENST00000505998 DEUP1Q05D60 604 aa6.57□□□□□ -1.36
NIPBL-205ENST00000505998 CHAF1AQ13111 956 aaPredicted RBP6.57□□□□□ -1.36
NIPBL-205ENST00000505998 GORABQ5T7V8 394 aa6.57□□□□□ -1.36
NIPBL-205ENST00000505998 POF1BQ8WVV4 589 aa6.57□□□□□ -1.36
NIPBL-205ENST00000505998 SNX18Q96RF0 628 aa6.57□□□□□ -1.36
NIPBL-205ENST00000505998 WDR24Q96S15 920 aa6.57□□□□□ -1.36
NIPBL-205ENST00000505998 MMS19Q96T76 1030 aa6.57□□□□□ -1.36
NIPBL-205ENST00000505998 MYH16Q9H6N6 1097 aa6.57□□□□□ -1.36
NIPBL-205ENST00000505998 ASAP1Q9ULH1 1129 aa6.57□□□□□ -1.36
NIPBL-205ENST00000505998 RALGAPBQ86X10 1494 aa6.57□□□□□ -1.36
NIPBL-205ENST00000505998 ADAMTS13Q76LX8 1427 aa6.57□□□□□ -1.36
NIPBL-205ENST00000505998 STRCP1A6NGW2 1772 aa6.57□□□□□ -1.36
NIPBL-205ENST00000505998 GPRASP1Q5JY77 1395 aa6.57□□□□□ -1.36
NIPBL-205ENST00000505998 PLEKHG1Q9ULL1 1385 aa6.57□□□□□ -1.36
NIPBL-205ENST00000505998 CPS1P31327 1500 aa6.56□□□□□ -1.36
NIPBL-205ENST00000505998 XIRP1Q702N8 1843 aaKnown RBP6.56□□□□□ -1.36
NIPBL-205ENST00000505998 SUV39H1O43463 412 aa6.56□□□□□ -1.36
NIPBL-205ENST00000505998 GLP2RO95838 553 aa6.56□□□□□ -1.36
NIPBL-205ENST00000505998 LDHAP00338 332 aaKnown RBP6.56□□□□□ -1.36
NIPBL-205ENST00000505998 PBX1P40424 430 aa6.56□□□□□ -1.36
NIPBL-205ENST00000505998 DGKQP52824 942 aa6.56□□□□□ -1.36
NIPBL-205ENST00000505998 COPB1P53618 953 aaKnown RBP6.56□□□□□ -1.36
NIPBL-205ENST00000505998 TXNL4AP83876 142 aaKnown RBP6.56□□□□□ -1.36
NIPBL-205ENST00000505998 MTAPQ13126 283 aa6.56□□□□□ -1.36
NIPBL-205ENST00000505998 FCRLBQ6BAA4 426 aa6.56□□□□□ -1.36
NIPBL-205ENST00000505998 TLDC1Q6P9B6 456 aa6.56□□□□□ -1.36
NIPBL-205ENST00000505998 TTC30AQ86WT1 665 aa6.56□□□□□ -1.36
NIPBL-205ENST00000505998 PRIMA1Q86XR5 153 aa6.56□□□□□ -1.36
NIPBL-205ENST00000505998 DNAJC10Q8IXB1 793 aa6.56□□□□□ -1.36
NIPBL-205ENST00000505998 PNPLA1Q8N8W4 532 aa6.56□□□□□ -1.36
NIPBL-205ENST00000505998 HELLSQ9NRZ9 838 aa6.56□□□□□ -1.36
NIPBL-205ENST00000505998 IGSF9Q9P2J2 1179 aa6.56□□□□□ -1.36
NIPBL-205ENST00000505998 DTNAQ9Y4J8 743 aa6.56□□□□□ -1.36
NIPBL-205ENST00000505998 COX11Q9Y6N1 276 aa6.56□□□□□ -1.36
NIPBL-205ENST00000505998 ALKQ9UM73 1620 aa6.56□□□□□ -1.36
NIPBL-205ENST00000505998 TECPR2O15040 1411 aa6.56□□□□□ -1.36
NIPBL-205ENST00000505998 RIMS2Q9UQ26 1411 aa6.56□□□□□ -1.36
NIPBL-205ENST00000505998 DLC1Q96QB1 1528 aa6.55□□□□□ -1.36
NIPBL-205ENST00000505998 H7C1Q1 480 aa6.55□□□□□ -1.36
NIPBL-205ENST00000505998 SMIM22K7EJ46 135 aa6.55□□□□□ -1.36
NIPBL-205ENST00000505998 ZNF37AP17032 561 aaPredicted RBP6.55□□□□□ -1.36
NIPBL-205ENST00000505998 DRD1P21728 446 aa6.55□□□□□ -1.36
NIPBL-205ENST00000505998 RENBPP51606 427 aa6.55□□□□□ -1.36
NIPBL-205ENST00000505998 ICA1Q05084 483 aa6.55□□□□□ -1.36
NIPBL-205ENST00000505998 PUM3Q15397 648 aaKnown RBP6.55□□□□□ -1.36
NIPBL-205ENST00000505998 C10orf62Q5T681 223 aaPredicted RBP6.55□□□□□ -1.36
NIPBL-205ENST00000505998 GRHL2Q6ISB3 625 aa6.55□□□□□ -1.36
NIPBL-205ENST00000505998 SERPINA13PQ6UXR4 307 aa6.55□□□□□ -1.36
NIPBL-205ENST00000505998 SMC5Q8IY18 1101 aa6.55□□□□□ -1.36
NIPBL-205ENST00000505998 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.55□□□□□ -1.36
NIPBL-205ENST00000505998 ENAHQ8N8S7 591 aaPredicted RBP6.55□□□□□ -1.36
NIPBL-205ENST00000505998 CRAMP1Q96RY5 1269 aa6.55□□□□□ -1.36
NIPBL-205ENST00000505998 PRPF18Q99633 342 aaKnown RBP6.55□□□□□ -1.36
NIPBL-205ENST00000505998 NUDT22Q9BRQ3 303 aa6.55□□□□□ -1.36
NIPBL-205ENST00000505998 USP29Q9HBJ7 922 aa6.55□□□□□ -1.36
NIPBL-205ENST00000505998 SERGEFQ9UGK8 458 aa6.55□□□□□ -1.36
NIPBL-205ENST00000505998 PIK3R4Q99570 1358 aa6.55□□□□□ -1.36
NIPBL-205ENST00000505998 ADGRB2O60241 1585 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms