RNA–Protein interactions for RNA: ENST00000504872.5

APBB3-209, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 4

Gene APBB3, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-209	ENST00000504872	DUS2	Q9NX74	493 aa	Known RBP	11.17	□□□□□ -0.62
APBB3-209	ENST00000504872	TAS2R14	Q9NYV8	317 aa		11.17	□□□□□ -0.62
APBB3-209	ENST00000504872	WDR35	Q9P2L0	1181 aa		11.17	□□□□□ -0.62
APBB3-209	ENST00000504872	FBXO10	Q9UK96	956 aa		11.17	□□□□□ -0.62
APBB3-209	ENST00000504872	WNT6	Q9Y6F9	365 aa		11.17	□□□□□ -0.62
APBB3-209	ENST00000504872	ITPR1	Q14643	2758 aa		11.17	□□□□□ -0.62
APBB3-209	ENST00000504872	IGSF10	Q6WRI0	2623 aa		11.17	□□□□□ -0.62
APBB3-209	ENST00000504872	DMXL2	Q8TDJ6	3036 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	KANSL1L	A0AUZ9	987 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	SLC12A8	A0AV02	714 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	SIGLEC16	A6NMB1	481 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	TRDMT1	O14717	391 aa	Known RBP	11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	SLC30A4	O14863	429 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	HSF2BP	O75031	334 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	LATS1	O95835	1130 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	TRUB2	O95900	331 aa	Known RBP	11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	PLEK	P08567	350 aa	Predicted RBP	11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	GJA4	P35212	333 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	MATK	P42679	507 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	CDK17	Q00537	523 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	DHCR24	Q15392	516 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	ARTN	Q5T4W7	220 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	OTUD1	Q5VV17	481 aa	Predicted RBP	11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	RNF43	Q68DV7	783 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	MMS22L	Q6ZRQ5	1243 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	TOGARAM2	Q6ZUX3	1019 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	MIB1	Q86YT6	1006 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	SIX5	Q8N196	739 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	CPXM2	Q8N436	756 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	TC2N	Q8N9U0	490 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	IPO4	Q8TEX9	1081 aa	Known RBP	11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	CENPI	Q92674	756 aa	Predicted RBP	11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	CLDN23	Q96B33	292 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	FAM149B1	Q96BN6	582 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	PLD4	Q96BZ4	506 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	SHD	Q96IW2	340 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	FCRL2	Q96LA5	508 aa	Predicted RBP	11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	TRIM62	Q9BVG3	475 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	FBRSL1	Q9HCM7	1045 aa	Known RBP	11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	ARHGEF3	Q9NR81	526 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	SPHK2	Q9NRA0	654 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	RRN3	Q9NYV6	651 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	ADAM22	Q9P0K1	906 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	MARK1	Q9P0L2	795 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	DLGAP2	Q9P1A6	1054 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	CALCOCO1	Q9P1Z2	691 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	NCDN	Q9UBB6	729 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	ADAMTS1	Q9UHI8	967 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	RASAL2	Q9UJF2	1139 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	AGO1	Q9UL18	857 aa	Known RBP	11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	STRIP2	Q9ULQ0	834 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	TLR6	Q9Y2C9	796 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	ZNF510	Q9Y2H8	683 aa		11.16	□□□□□ -0.62
APBB3-209	ENST00000504872	F5	P12259	2224 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872		A0A087X0T9	212 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	KCNU1	A8MYU2	1149 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	SPECC1L-ADORA2A	F8WAN1	911 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	MAN2B1	O00754	1011 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	IRAK2	O43187	625 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	RTN2	O75298	545 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	DAB1	O75553	588 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	GRAP2	O75791	330 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	CYP17A1	P05093	508 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	FAM228B	P0C875	321 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	TFE3	P19532	575 aa	Predicted RBP	11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	CTH	P32929	405 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	FLT3	P36888	993 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	OPRD1	P41143	372 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	DCAF6	Q58WW2	860 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	PLEKHA7	Q6IQ23	1121 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	PPP1R2P3	Q6NXS1	205 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	TXNDC11	Q6PKC3	985 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	MAMSTR	Q6ZN01	415 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	RSRC2	Q7L4I2	434 aa	Known RBP	11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	TMEM25	Q86YD3	366 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	ETFBKMT	Q8IXQ9	262 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	C3orf20	Q8ND61	904 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	ADAM32	Q8TC27	787 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	CSGALNACT1	Q8TDX6	532 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	GOLGA1	Q92805	767 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	ATP2A3	Q93084	1043 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	MSANTD3	Q96H12	275 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	BBC3	Q96PG8	261 aa	Predicted RBP	11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	IRX2	Q9BZI1	471 aa	Predicted RBP	11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	TMEM51	Q9NW97	253 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	CA14	Q9ULX7	337 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	SH3BP1	Q9Y3L3	701 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	MTF2	Q9Y483	593 aa	Predicted RBP	11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	PIAS3	Q9Y6X2	628 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	LAMA5	O15230	3695 aa		11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	HELZ	P42694	1942 aa	Known RBP	11.15	□□□□□ -0.62
APBB3-209	ENST00000504872	HECTD1	Q9ULT8	2610 aa		11.14	□□□□□ -0.63
APBB3-209	ENST00000504872	SSU72P8	A0A1W2PR75	194 aa		11.14	□□□□□ -0.63
APBB3-209	ENST00000504872	C2CD4B	A6NLJ0	364 aa		11.14	□□□□□ -0.63
APBB3-209	ENST00000504872	HOXC11	O43248	304 aa	Predicted RBP	11.14	□□□□□ -0.63
APBB3-209	ENST00000504872	MSI1	O43347	362 aa	Known RBP	11.14	□□□□□ -0.63
APBB3-209	ENST00000504872	MFAP3L	O75121	409 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms