RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 FNIP2Q9P278 1114 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 SAE1Q9UBE0 346 aaPredicted RBP13.76□□□□□ -0.21
LMNA-220ENST00000504687 TLR6Q9Y2C9 796 aa13.76□□□□□ -0.21
LMNA-220ENST00000504687 BRCA2P51587 3418 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 WDR27A2RRH5 827 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 C5orf60A6NFR6 353 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 KCNU1A8MYU2 1149 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 GOLGA8KD6RF30 607 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 I6L893 689 aaPredicted RBP13.75□□□□□ -0.21
LMNA-220ENST00000504687 EEF2KO00418 725 aaKnown RBP13.75□□□□□ -0.21
LMNA-220ENST00000504687 GCATO75600 419 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 CCR1P32246 355 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 RPL22P35268 128 aaKnown RBP13.75□□□□□ -0.21
LMNA-220ENST00000504687 GGCXP38435 758 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 GLUD2P49448 558 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 FAM193AP78312 1265 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 RING1Q06587 406 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 GPS1Q13098 491 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 RAB33AQ14088 237 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 BTG3Q14201 252 aaPredicted RBP13.75□□□□□ -0.21
LMNA-220ENST00000504687 DDR2Q16832 855 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 MANEALQ5VSG8 457 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 DARS2Q6PI48 645 aaKnown RBP13.75□□□□□ -0.21
LMNA-220ENST00000504687 UNC45BQ8IWX7 931 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 PPIL6Q8IXY8 311 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 GOLGA6L1Q8N7Z2 621 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 GLIS1Q8NBF1 620 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 PDZD8Q8NEN9 1154 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 RIN2Q8WYP3 895 aaPredicted RBP13.75□□□□□ -0.21
LMNA-220ENST00000504687 EDEM1Q92611 657 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 MYRFLQ96LU7 910 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 RUFY1Q96T51 708 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 EPAS1Q99814 870 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 FAM118BQ9BPY3 351 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 CLSTN3Q9BQT9 956 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 UBE2OQ9C0C9 1292 aaKnown RBP13.75□□□□□ -0.21
LMNA-220ENST00000504687 EPB41L4BQ9H329 900 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 NMUR1Q9HB89 426 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 TLR8Q9NR97 1041 aaKnown RBP13.75□□□□□ -0.21
LMNA-220ENST00000504687 DTLQ9NZJ0 730 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 PAK5Q9P286 719 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 SSX2IPQ9Y2D8 614 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 CDY1Q9Y6F8 540 aa13.75□□□□□ -0.21
LMNA-220ENST00000504687 MRPL42Q9Y6G3 142 aaKnown RBP13.75□□□□□ -0.21
LMNA-220ENST00000504687 A0A1W2PQH9 124 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 H3BQF6 201 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 AMPD1P23109 780 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 OAS2P29728 719 aaKnown RBP13.74□□□□□ -0.21
LMNA-220ENST00000504687 PBX3P40426 434 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 KPNA1P52294 538 aaPredicted RBP13.74□□□□□ -0.21
LMNA-220ENST00000504687 GDF10P55107 478 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 SLC10A2Q12908 348 aaPredicted RBP13.74□□□□□ -0.21
LMNA-220ENST00000504687 PDK1Q15118 436 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 PRKD1Q15139 912 aaPredicted RBP13.74□□□□□ -0.21
LMNA-220ENST00000504687 EMC10Q5UCC4 262 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 KLHDC10Q6PID8 442 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 PRSS55Q6UWB4 352 aaPredicted RBP13.74□□□□□ -0.21
LMNA-220ENST00000504687 NPNTQ6UXI9 565 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 PYROXD2Q8N2H3 581 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 NAT8LQ8N9F0 302 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 PHOSPHO2Q8TCD6 241 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 SP7Q8TDD2 431 aaPredicted RBP13.74□□□□□ -0.21
LMNA-220ENST00000504687 CLP1Q92989 425 aaKnown RBP13.74□□□□□ -0.21
LMNA-220ENST00000504687 TRMT2BQ96GJ1 504 aaKnown RBP13.74□□□□□ -0.21
LMNA-220ENST00000504687 B3GALT6Q96L58 329 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 PGLYRP2Q96PD5 576 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 TKTL2Q9H0I9 626 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 CRISPLD1Q9H336 500 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 RETREG1Q9H6L5 497 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 RXFP1Q9HBX9 757 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 ANLNQ9NQW6 1124 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 PRDM5Q9NQX1 630 aaPredicted RBP13.74□□□□□ -0.21
LMNA-220ENST00000504687 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.74□□□□□ -0.21
LMNA-220ENST00000504687 PLAAQ9Y263 795 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 ATP8A1Q9Y2Q0 1164 aa13.74□□□□□ -0.21
LMNA-220ENST00000504687 WASH4PA8MWX3 477 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 E7ESA3 106 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 H7C0C1 242 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 CHADO15335 359 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 FGF10O15520 208 aaPredicted RBP13.73□□□□□ -0.21
LMNA-220ENST00000504687 MTSS1O43312 755 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 LILRB3O75022 631 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 GJB5O95377 273 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 IGLV3-27P01718 113 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 FGBP02675 491 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 ABHD2P08910 425 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 LINC00271P0C7V0 271 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 TSHRP16473 764 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 OR1D2P34982 312 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 SERPINB6P35237 376 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 ATP5OP48047 213 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 PPP3CCP48454 512 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 TPI1P60174 286 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 USP46P62068 366 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 GBE1Q04446 702 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 DUSP4Q13115 394 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 TRIP13Q15645 432 aaPredicted RBP13.73□□□□□ -0.21
LMNA-220ENST00000504687 TRIP4Q15650 581 aaPredicted RBP13.73□□□□□ -0.21
LMNA-220ENST00000504687 MGAT5BQ3V5L5 792 aa13.73□□□□□ -0.21
LMNA-220ENST00000504687 ARTNQ5T4W7 220 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms