RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 SULT1E1P49888 294 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 RPL7AP62424 266 aaKnown RBP12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 PPP2R5DQ14738 602 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 ITPRIPL2Q3MIP1 535 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 C10orf76Q5T2E6 689 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 OTUD1Q5VV17 481 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 TRIM68Q6AZZ1 485 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 DCUN1D2Q6PH85 259 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 DENND1CQ8IV53 801 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 BBS7Q8IWZ6 715 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 FAM217AQ8IXS0 508 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 RNF166Q96A37 237 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 CFAP57Q96MR6 1250 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 TBCBQ99426 244 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 ADAM33Q9BZ11 813 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 EBF3Q9H4W6 596 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 MRPL47Q9HD33 250 aaKnown RBP12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 SPTLC3Q9NUV7 552 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 DDIT4Q9NX09 232 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 STOML2Q9UJZ1 356 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 AGO1Q9UL18 857 aaKnown RBP12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 SCINQ9Y6U3 715 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 CUL9Q8IWT3 2517 aa12.38□□□□□ -0.43
PDLIM5-208ENST00000504489 TMEM191CA6NGB0 347 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 KCNU1A8MYU2 1149 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 SCAMP3O14828 347 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 APOEP02649 317 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 CYP1A2P05177 515 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 H2AFZP0C0S5 128 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 TFE3P19532 575 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 ABCB4P21439 1286 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 SDC4P31431 198 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 CCR1P32246 355 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 CYLC1P35663 651 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 CHKAP35790 457 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 CXCR3P49682 368 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 ZNF143P52747 638 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 PRKCQQ04759 706 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 DEUP1Q05D60 604 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 TNK2Q07912 1038 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 SIGLEC14Q08ET2 396 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 NR1H3Q13133 447 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 NME3Q13232 169 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 MTA1Q13330 715 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 CCDC14Q49A88 953 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 SLC44A4Q53GD3 710 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 ZC3H12AQ5D1E8 599 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 H2AFVQ71UI9 128 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 STRADAQ7RTN6 431 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 TMEM139Q8IV31 216 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 CPXM2Q8N436 756 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 CPA6Q8N4T0 437 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 FNIP1Q8TF40 1166 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 CENPIQ92674 756 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 MSANTD3Q96H12 275 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 MCEEQ96PE7 176 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 BAG1Q99933 345 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 CNPY3Q9BT09 278 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 IRX2Q9BZI1 471 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 THAP2Q9H0W7 228 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 C8orf33Q9H7E9 229 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 ECT2Q9H8V3 914 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 GTSE1Q9NYZ3 720 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 CALCOCO1Q9P1Z2 691 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 MYO1AQ9UBC5 1043 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 INTUQ9ULD6 942 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 PAXBP1Q9Y5B6 917 aa12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 EPN1Q9Y6I3 576 aaPredicted RBP12.37□□□□□ -0.43
PDLIM5-208ENST00000504489 KMT2EQ8IZD2 1858 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 OTOL1A6NHN0 477 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 EIF3CLB5ME19 914 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 ACSL4O60488 711 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 ADH1CP00326 375 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 CYP17A1P05093 508 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 TMEM253P0C7T8 217 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 SLC11A2P49281 568 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 DHCR24Q15392 516 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 MLF2Q15773 248 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 BRMS1LQ5PSV4 323 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 LY6G5CQ5SRR4 150 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 ADGRF1Q5T601 910 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 RHBDF2Q6PJF5 856 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 TRIM67Q6ZTA4 783 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 SND1Q7KZF4 910 aaKnown RBP eCLIP12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 RALGPS2Q86X27 583 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 ATP6V0D2Q8N8Y2 350 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 ZNF454Q8N9F8 522 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 CTNNBL1Q8WYA6 563 aaPredicted RBP12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 RNF34Q969K3 372 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 SHDQ96IW2 340 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 BTN2A3PQ96KV6 586 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 EIF3CQ99613 913 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 DDX50Q9BQ39 737 aaKnown RBP12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 PACSIN1Q9BY11 444 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 WDCPQ9H6R7 721 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 SPHK2Q9NRA0 654 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 HEBP1Q9NRV9 189 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 PIGVQ9NUD9 493 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 SLC12A6Q9UHW9 1150 aa12.36□□□□□ -0.43
PDLIM5-208ENST00000504489 FBXL21Q9UKT6 434 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms