RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 THAP1Q9NVV9 213 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 ANKRD26Q9UPS8 1709 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 FAM237AA0A1B0GTK4 181 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 LACTBL1A8MY62 500 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 RAMP2O60895 175 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 NME5P56597 212 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 POU6F1Q14863 301 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 OLFML2BQ68BL8 750 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 TMPRSS6Q8IU80 811 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 TCP10LQ8TDR4 215 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 C6orf203Q9P0P8 240 aaPredicted RBP16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 TMCC3Q9ULS5 477 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 ANKRD6Q9Y2G4 727 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 MGAT4DA6NG13 374 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 CCDC159P0C7I6 412 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 SCNN1BP51168 640 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 TBX4P57082 545 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 MTFR1LQ9H019 292 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 SIK3Q9Y2K2 1263 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 ZSCAN5CA6NGD5 496 aaPredicted RBP16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 DDHD2O94830 711 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 ATP5BP06576 529 aaKnown RBP16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 CREG2Q8IUH2 290 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 BTN2A2Q8WVV5 523 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 DNAJB3Q8WWF6 145 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 EDEM1Q92611 657 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 VPS33AQ96AX1 596 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 CELF6Q96J87 481 aaKnown RBP16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 SERPINB11Q96P15 392 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 ELOVL6Q9H5J4 265 aa16.94■□□□□ 0.3
PCDHA1-203ENST00000504120 C3P01024 1663 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 WDR27A2RRH5 827 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 APOC4-APOC2K7ER74 178 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 RNF103O00237 685 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 TRIM13O60858 407 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 APOC2P02655 101 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 GPC1P35052 558 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 PRKCIP41743 596 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 TBL3Q12788 808 aaKnown RBP16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 RRP1BQ14684 758 aaKnown RBP16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 AGKQ53H12 422 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 WASHC2DQ5SRD0 308 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 ERAP2Q6P179 960 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 ITIH5Q86UX2 942 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 FAM136AQ96C01 138 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 LNPEPQ9UIQ6 1025 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 PCDHGC5Q9Y5F6 944 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 PRR23D1E9PI22 279 aaPredicted RBP16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 PRR23D2P0DMB1 279 aaPredicted RBP16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 SERPINB1P30740 379 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 PGS1Q32NB8 556 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 CBWD6Q4V339 395 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 CBWD3Q5JTY5 395 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 CBWD5Q5RIA9 395 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 DACT2Q5SW24 774 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 RETSATQ6NUM9 610 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 VAT1Q99536 393 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 DNAJC18Q9H819 358 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 CPA4Q9UI42 421 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 RNASEH1O60930 286 aaKnown RBP16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 COPS7BQ9H9Q2 264 aaPredicted RBP16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 DMAP1Q9NPF5 467 aaPredicted RBP16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 TRDMT1O14717 391 aaKnown RBP16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 ENDOD1O94919 500 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 ZCCHC9Q8N567 271 aaKnown RBP16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 TERB1Q8NA31 727 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 HDAC7Q8WUI4 952 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 ANKRD27Q96NW4 1050 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 CAMKK2Q96RR4 588 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 ABHD16BQ9H3Z7 469 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 TMEM134Q9H6X4 195 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 STARD7Q9NQZ5 370 aa16.93■□□□□ 0.3
PCDHA1-203ENST00000504120 PDHXO00330 501 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 WNT10BO00744 389 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 FAM153BP0C7A2 387 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 AMPD1P23109 780 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 FAM153CQ494X1 144 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 C1orf186Q6ZWK4 172 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 KCNK18Q7Z418 384 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 HIC2Q96JB3 615 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 ACTR8Q9H981 624 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 KCND1Q9NSA2 647 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 FAM153AQ9UHL3 310 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 DNPEPQ9ULA0 475 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 AKAP5P24588 427 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 MGAT1P26572 445 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 MIPP30301 263 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 CDK7P50613 346 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 CCNG1P51959 295 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 EIF2B5Q13144 721 aaKnown RBP16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 VGLL2Q8N8G2 317 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 KRT6AP02538 564 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 KRT6BP04259 564 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 GRK3P35626 688 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 SKIV2L2P42285 1042 aaKnown RBP16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 CAPZA2P47755 286 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 KRT6CP48668 564 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 PRMT9Q6P2P2 845 aa16.92■□□□□ 0.3
PCDHA1-203ENST00000504120 CYP4Z1Q86W10 505 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms