RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 ATP6V0D1P61421 351 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 YWHAZP63104 245 aaKnown RBP4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 PSMD5Q16401 504 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 ANGEL2Q5VTE6 544 aaKnown RBP4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 PLEKHA7Q6IQ23 1121 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 PRR23BQ6ZRT6 265 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 LPCAT2Q7L5N7 544 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 IRF2BP2Q7Z5L9 587 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 SCN4BQ8IWT1 228 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 ADGRF2Q8IZF7 708 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 SVOPQ8N4V2 548 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 CCNYL1Q8N7R7 359 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 TAS1R2Q8TE23 839 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 TMEM174Q8WUU8 243 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 RIN2Q8WYP3 895 aaPredicted RBP4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 SEPT8Q92599 483 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 UBE2E3Q969T4 207 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 CEP19Q96LK0 163 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 AGBL1Q96MI9 1066 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 SPATA13Q96N96 652 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 BTBD10Q9BSF8 475 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 OSBPL10Q9BXB5 764 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 NFKBIZQ9BYH8 718 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 TTYH3Q9C0H2 523 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 CPVLQ9H3G5 476 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 TASP1Q9H6P5 420 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 ZNF556Q9HAH1 456 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 ABCC13Q9NSE7 274 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 GIMAP4Q9NUV9 329 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 GGA3Q9NZ52 723 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 AHSPQ9NZD4 102 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 ADA2Q9NZK5 511 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 TMEM216Q9P0N5 145 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 CHMP2BQ9UQN3 213 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 GIT1Q9Y2X7 761 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 NDUFAF1Q9Y375 327 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 TRPV2Q9Y5S1 764 aa4.88□□□□□ -1.63
NDFIP1-202ENST00000503388 DPYSL4O14531 572 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 AREL1O15033 823 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 DAB1O75553 588 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 AP1G2O75843 785 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 KRT6AP02538 564 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 KRT6BP04259 564 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 ITGB3P05106 788 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 AKR1A1P14550 325 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 CPB1P15086 417 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 ITGB6P18564 788 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 ADORA2BP29275 332 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 PTPN9P43378 593 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 PPP3CCP48454 512 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 KRT6CP48668 564 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 CACNB3P54284 484 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 OSTNP61366 133 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 PEX6Q13608 980 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 PRKG1Q13976 671 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 POLD3Q15054 466 aaPredicted RBP4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 LONRF1Q17RB8 773 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 MTX3Q5HYI7 312 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 GRAMD4Q6IC98 578 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 C1orf228Q6PIY5 440 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 RGS9BPQ6ZS82 235 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 RELL1Q8IUW5 271 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 TMEM139Q8IV31 216 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 LRRC34Q8IZ02 419 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 FBXO36Q8NEA4 188 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 ACTL9Q8TC94 416 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 AGR3Q8TD06 166 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 SLC26A7Q8TE54 656 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 C2orf15Q8WU43 125 aaKnown RBP4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 HTR3CQ8WXA8 447 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 ZNF669Q96BR6 464 aaPredicted RBP4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 NAF1Q96HR8 494 aaKnown RBP4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 C9orf72Q96LT7 481 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 QRFPRQ96P65 431 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 CBWD1Q9BRT8 395 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 TRMT6Q9UJA5 497 aaKnown RBP4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 VAV3Q9UKW4 847 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 Q9Y3F1 56 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 FAM32AQ9Y421 112 aaKnown RBP4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 DOCK1Q14185 1865 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 CCL15-CCL14A0A0B4J2E2 113 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 MDM4O15151 490 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 ABL1P00519 1130 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 MSH3P20585 1137 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 SAT1P21673 171 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 GRIK1P39086 918 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 ERVK-9P63128 1117 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 SKP1P63208 163 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 ZNF177Q13360 481 aaPredicted RBP4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 CCL15Q16663 113 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 TMEM259Q4ZIN3 620 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 PCID2Q5JVF3 399 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 CELF3Q5SZQ8 465 aaKnown RBP4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 EMC10Q5UCC4 262 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 WDR59Q6PJI9 974 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 DNAJB7Q7Z6W7 309 aaPredicted RBP4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 CHSY1Q86X52 802 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 ANKRD52Q8NB46 1076 aa4.87□□□□□ -1.63
NDFIP1-202ENST00000503388 KYQ8NBH2 561 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms