RNA–Protein interactions for RNA: ENST00000502840.5

CDC42SE2-205, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-205ENST00000502840 NIP7Q9Y221 180 aaKnown RBP eCLIP3.43□□□□□ -1.86
CDC42SE2-205ENST00000502840 CDYLQ9Y232 598 aa3.43□□□□□ -1.86
CDC42SE2-205ENST00000502840 USP15Q9Y4E8 981 aaPredicted RBP3.43□□□□□ -1.86
CDC42SE2-205ENST00000502840 PCSK5Q92824 1860 aa3.43□□□□□ -1.86
CDC42SE2-205ENST00000502840 MAP3K15Q6ZN16 1313 aa3.43□□□□□ -1.86
CDC42SE2-205ENST00000502840 WDR17Q8IZU2 1322 aa3.43□□□□□ -1.86
CDC42SE2-205ENST00000502840 C1orf167Q5SNV9 1468 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 PXDNQ92626 1479 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 ARHGAP23Q9P227 1491 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 CARMIL3Q8ND23 1372 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 MED23Q9ULK4 1368 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 CCDC196A0A1B0GTZ2 297 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 POM121BA6NF01 834 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 USP27XA6NNY8 438 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 CLCA1A8K7I4 914 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 BTBD18B2RXH4 712 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 KIF2AO00139 706 aaPredicted RBP3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 SH2B2O14492 632 aaPredicted RBP3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 POLR3GO15318 223 aaPredicted RBP3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 POLR2DO15514 142 aaKnown RBP3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 TBC1D4O60343 1298 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 PRDM1O75626 825 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 WDHD1O75717 1129 aaPredicted RBP3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 YEATS4O95619 227 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 CSF1RP07333 972 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 GRPP07492 148 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 ELANEP08246 267 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 TPM1P09493 284 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 CKBP12277 381 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 FGFR2P21802 821 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 PPM1AP35813 382 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 GYG1P46976 350 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 STT3AP46977 705 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 TRAPPC10P48553 1259 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 GNG11P61952 73 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 DYNLL1P63167 89 aaKnown RBP3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 POU6F2P78424 691 aaPredicted RBP3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 TAP1Q03518 808 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 SLC13A2Q13183 592 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 RAB32Q13637 225 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 DHX8Q14562 1220 aaKnown RBP3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 KARSQ15046 597 aaKnown RBP3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 PUM3Q15397 648 aaKnown RBP3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 MPEG1Q2M385 716 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 DPCR1Q3MIW9 517 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 SLC44A4Q53GD3 710 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 AKNAD1Q5T1N1 836 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 DCAF12L1Q5VU92 463 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 SUSD4Q5VX71 490 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 RRAGBQ5VZM2 374 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 LMBRD2Q68DH5 695 aaPredicted RBP3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 KRBA2Q6ZNG9 492 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 BRINP3Q76B58 766 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 ZNF575Q86XF7 245 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 ANKRD18AQ8IVF6 992 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 RHOT2Q8IXI1 618 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 MB21D2Q8IYB1 491 aaPredicted RBP3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 DIS3L2Q8IYB7 885 aaKnown RBP3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 TMTC2Q8N394 836 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 CCDC150Q8NCX0 1101 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 ENGASEQ8NFI3 743 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 OR56A1Q8NGH5 318 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 STAMQ92783 540 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 ZBTB9Q96C00 473 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 DHX58Q96C10 678 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 C18orf8Q96DM3 657 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 PLIN2Q99541 437 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 CRB3Q9BUF7 120 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 SPATA5L1Q9BVQ7 753 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 BRIP1Q9BX63 1249 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 TOR3AQ9H497 397 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 RNPEPQ9H4A4 650 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 RNF41Q9H4P4 317 aaPredicted RBP3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 VAT1LQ9HCJ6 419 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 SACM1LQ9NTJ5 587 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 TRMT13Q9NUP7 481 aaKnown RBP3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 ARGLU1Q9NWB6 273 aaPredicted RBP3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 TFCP2L1Q9NZI6 479 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 OGFRQ9NZT2 677 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 CTTNBP2NLQ9P2B4 639 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 HESX1Q9UBX0 185 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 PADI4Q9UM07 663 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 PLEKHM1Q9Y4G2 1056 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 SLIT1O75093 1534 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 PIK3C2AO00443 1686 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 ZMYM6O95789 1325 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 MROH5Q6ZUA9 1318 aa3.42□□□□□ -1.86
CDC42SE2-205ENST00000502840 SETD1AO15047 1707 aaKnown RBP3.41□□□□□ -1.86
CDC42SE2-205ENST00000502840 COL15A1P39059 1388 aa3.41□□□□□ -1.86
CDC42SE2-205ENST00000502840 PALLDQ8WX93 1383 aa3.41□□□□□ -1.86
CDC42SE2-205ENST00000502840 CYP2D7A0A087X1C5 515 aa3.41□□□□□ -1.86
CDC42SE2-205ENST00000502840 MBD3L4A6NDZ8 208 aaPredicted RBP3.41□□□□□ -1.86
CDC42SE2-205ENST00000502840 MBD3L3A6NE82 208 aaPredicted RBP3.41□□□□□ -1.86
CDC42SE2-205ENST00000502840 UNC119BA6NIH7 251 aa3.41□□□□□ -1.86
CDC42SE2-205ENST00000502840 POLRMTO00411 1230 aaKnown RBP3.41□□□□□ -1.86
CDC42SE2-205ENST00000502840 PPP6R2O75170 966 aa3.41□□□□□ -1.86
CDC42SE2-205ENST00000502840 KIF20AO95235 890 aa3.41□□□□□ -1.86
CDC42SE2-205ENST00000502840 SPDEFO95238 335 aa3.41□□□□□ -1.86
CDC42SE2-205ENST00000502840 MT-ND5P03915 603 aa3.41□□□□□ -1.86
CDC42SE2-205ENST00000502840 CFIP05156 583 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms