RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 PHTF2Q8N3S3 785 aa11.16□□□□□ -0.62
UBE2D3-212ENST00000502563 ST13P5Q8NFI4 369 aaPredicted RBP11.16□□□□□ -0.62
UBE2D3-212ENST00000502563 CENPIQ92674 756 aaPredicted RBP11.16□□□□□ -0.62
UBE2D3-212ENST00000502563 CD101Q93033 1021 aa11.16□□□□□ -0.62
UBE2D3-212ENST00000502563 XPO6Q96QU8 1125 aaKnown RBP11.16□□□□□ -0.62
UBE2D3-212ENST00000502563 P2RY13Q9BPV8 354 aa11.16□□□□□ -0.62
UBE2D3-212ENST00000502563 TRIM5Q9C035 493 aa11.16□□□□□ -0.62
UBE2D3-212ENST00000502563 IRF2BPLQ9H1B7 796 aa11.16□□□□□ -0.62
UBE2D3-212ENST00000502563 RETREG1Q9H6L5 497 aa11.16□□□□□ -0.62
UBE2D3-212ENST00000502563 ABHD10Q9NUJ1 306 aa11.16□□□□□ -0.62
UBE2D3-212ENST00000502563 SFMBT1Q9UHJ3 866 aa11.16□□□□□ -0.62
UBE2D3-212ENST00000502563 NENFQ9UMX5 172 aa11.16□□□□□ -0.62
UBE2D3-212ENST00000502563 SLC27A6Q9Y2P4 619 aa11.16□□□□□ -0.62
UBE2D3-212ENST00000502563 KIAA1549LQ6ZVL6 1849 aa11.16□□□□□ -0.62
UBE2D3-212ENST00000502563 MIA3Q5JRA6 1907 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 C2CD4BA6NLJ0 364 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 FAM170BA6NMN3 283 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 CHURC1-FNTBB4DL54 471 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 PIK3R2O00459 728 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 DDX3XO00571 662 aaKnown RBP eCLIP11.15□□□□□ -0.621e-29■■□□□ 13.1
UBE2D3-212ENST00000502563 NPC1O15118 1278 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 ACSL4O60488 711 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 PDGFBP01127 241 aaPredicted RBP11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 APOEP02649 317 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 CYBBP04839 570 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 CXCR3P49682 368 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 AIF1P55008 147 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 TAF5Q15542 800 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 ASTE1Q2TB18 679 aaPredicted RBP11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 C5orf22Q49AR2 442 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 MPPE1Q53F39 396 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 TTC39BQ5VTQ0 682 aaPredicted RBP11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 FYB2Q5VWT5 728 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 PLEKHA7Q6IQ23 1121 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 WDR59Q6PJI9 974 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 MMS22LQ6ZRQ5 1243 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 GPIHBP1Q8IV16 184 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 DENND1CQ8IV53 801 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 WBP2Q969T9 261 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 NCAPGQ9BPX3 1015 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 C11orf70Q9BRQ4 267 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 ARHGEF38Q9NXL2 777 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 ARHGAP20Q9P2F6 1191 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 SLC12A6Q9UHW9 1150 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 STARD13Q9Y3M8 1113 aa11.15□□□□□ -0.62
UBE2D3-212ENST00000502563 MSI1O43347 362 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 ATG13O75143 517 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 IRF1P10914 325 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 KRT3P12035 628 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 ABCB4P21439 1286 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 FECHP22830 423 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 CDC25BP30305 580 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 HOXA6P31267 233 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 FLT3P36888 993 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 GRIA2P42262 883 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 TNFRSF4P43489 277 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 NRG1Q02297 640 aaPredicted RBP11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 ACAP1Q15027 740 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 EIF4HQ15056 248 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 SLC18A3Q16572 532 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 TSR1Q2NL82 804 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 ZNF528Q3MIS6 628 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 TDRD12Q587J7 1177 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 FAM133BQ5BKY9 247 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 OTUD1Q5VV17 481 aaPredicted RBP11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 TMEM25Q86YD3 366 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 TMEM105Q8N8V8 129 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 ATP6V0D2Q8N8Y2 350 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 FLCNQ8NFG4 579 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 C1orf74Q96LT6 269 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 PNKPQ96T60 521 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 MRPL47Q9HD33 250 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 PARVAQ9NVD7 372 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 ZNHIT6Q9NWK9 470 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 DDIT4Q9NX09 232 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 ADAMTS1Q9UHI8 967 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 LCMT1Q9UIC8 334 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 SCINQ9Y6U3 715 aa11.14□□□□□ -0.63
UBE2D3-212ENST00000502563 TYW5A2RUC4 315 aaKnown RBP11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 ANKRD62A6NC57 917 aa11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 FAM86C2PA6NEL3 165 aa11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 EIF3CLB5ME19 914 aaKnown RBP11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 AKR1B15C9JRZ8 316 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 M0QYT0 321 aa11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 AP5Z1O43299 807 aa11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 CHRM1P11229 460 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 TYRP14679 529 aa11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 DESP17661 470 aa11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 SDC4P31431 198 aa11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 RDXP35241 583 aaKnown RBP11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 SOX9P48436 509 aa11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 GALK1P51570 392 aa11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 ZNF75DP51815 510 aa11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 ZNF143P52747 638 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 MRPS21P82921 87 aaKnown RBP11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 SCAPQ12770 1279 aa11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 MAMLD1Q13495 774 aa11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 UBXN2BQ14CS0 331 aa11.13□□□□□ -0.63
UBE2D3-212ENST00000502563 MS4A13Q5J8X5 152 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms