RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 FAM71BQ8TC56 605 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 TEKT4Q8WW24 435 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.99□□□□□ -1.13
CDC42-205ENST00000498236 SEC14L1Q92503 715 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 SLCO2A1Q92959 643 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 SPACA7Q96KW9 195 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 NSUN5Q96P11 429 aaKnown RBP7.99□□□□□ -1.13
CDC42-205ENST00000498236 SLITRK1Q96PX8 696 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 SLC2A13Q96QE2 648 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 KRT12Q99456 494 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 RHOXF2Q9BQY4 288 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 LRRC1Q9BTT6 524 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 TRIM62Q9BVG3 475 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 AP1M1Q9BXS5 423 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 GPR62Q9BZJ7 368 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 LRRC19Q9H756 370 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 DMAP1Q9NPF5 467 aaPredicted RBP7.99□□□□□ -1.13
CDC42-205ENST00000498236 TMEM30AQ9NV96 361 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 TMLHEQ9NVH6 421 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 RRN3Q9NYV6 651 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 PCYOX1Q9UHG3 505 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 USP18Q9UMW8 372 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 PRG3Q9Y2Y8 225 aaPredicted RBP7.99□□□□□ -1.13
CDC42-205ENST00000498236 NR2E1Q9Y466 385 aa7.99□□□□□ -1.13
CDC42-205ENST00000498236 FNDC1Q4ZHG4 1894 aaPredicted RBP7.98□□□□□ -1.13
CDC42-205ENST00000498236 MDM4O15151 490 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 SIN3BO75182 1162 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 ERLIN1O75477 346 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 TRUB2O95900 331 aaKnown RBP7.98□□□□□ -1.13
CDC42-205ENST00000498236 ZBED1O96006 694 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 RALAP11233 206 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 LCP1P13796 627 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 CSF2RAP15509 400 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 TCF4P15884 667 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 RAG1P15918 1043 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 IL1R2P27930 398 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 MIPP30301 263 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 CDKN2BP42772 138 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 SSR1P43307 286 aaKnown RBP7.98□□□□□ -1.13
CDC42-205ENST00000498236 ALDH7A1P49419 539 aaKnown RBP7.98□□□□□ -1.13
CDC42-205ENST00000498236 TKTL1P51854 596 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 CACNA2D1P54289 1103 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 DAOAP59103 153 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 WDR5P61964 334 aaKnown RBP7.98□□□□□ -1.13
CDC42-205ENST00000498236 VSNL1P62760 191 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 DHX34Q14147 1143 aaKnown RBP7.98□□□□□ -1.13
CDC42-205ENST00000498236 SLC25A52Q3SY17 297 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 TFDP3Q5H9I0 405 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 FAM171A1Q5VUB5 890 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 DAB2IPQ5VWQ8 1189 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 ZNF280DQ6N043 979 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 AADACL2Q6P093 401 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 FUT10Q6P4F1 479 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 DRICH1Q6PGQ1 229 aaPredicted RBP7.98□□□□□ -1.13
CDC42-205ENST00000498236 SPOCD1Q6ZMY3 1216 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 ANKS3Q6ZW76 656 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 CYP4V2Q6ZWL3 525 aaPredicted RBP7.98□□□□□ -1.13
CDC42-205ENST00000498236 STRADAQ7RTN6 431 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 MTERF4Q7Z6M4 381 aaKnown RBP7.98□□□□□ -1.13
CDC42-205ENST00000498236 SPATA2LQ8IUW3 424 aaPredicted RBP7.98□□□□□ -1.13
CDC42-205ENST00000498236 IFT20Q8IY31 132 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 CMTR2Q8IYT2 770 aaKnown RBP7.98□□□□□ -1.13
CDC42-205ENST00000498236 ZDHHC14Q8IZN3 488 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 CLEC4CQ8WTT0 213 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 C2orf15Q8WU43 125 aaKnown RBP7.98□□□□□ -1.13
CDC42-205ENST00000498236 RNF34Q969K3 372 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 C8orf48Q96LL4 319 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 CEP295NLQ96MC4 621 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 KCNK16Q96T55 309 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 FRMD8P1Q9BZ68 369 aaPredicted RBP7.98□□□□□ -1.13
CDC42-205ENST00000498236 OSBPL8Q9BZF1 889 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 EPC1Q9H2F5 836 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 IGFLR1Q9H665 355 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 CWH43Q9H720 699 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 LIN7BQ9HAP6 207 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 POPDC2Q9HBU9 364 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 IL23AQ9NPF7 189 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 GDF3Q9NR23 364 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 TMEM51Q9NW97 253 aa7.98□□□□□ -1.13
CDC42-205ENST00000498236 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.98□□□□□ -1.134e-9■■□□□ 13.2
CDC42-205ENST00000498236 FEZ2Q9UHY8 353 aaPredicted RBP7.98□□□□□ -1.13
CDC42-205ENST00000498236 hCG_1818297A0A087WSY0 165 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 TCRBV7S2A1N4TA0A589 114 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 PIK3R2O00459 728 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 RAD51CO43502 376 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 ATP8B1O43520 1251 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 PRPSAP2O60256 369 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 GRAP2O75791 330 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 TJP3O95049 919 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 KRT1P04264 644 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 BDNFP23560 247 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 KDELR1P24390 212 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 GSTT1P30711 240 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 ARSEP51690 589 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 AIF1P55008 147 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 DRG2P55039 364 aaKnown RBP7.97□□□□□ -1.13
CDC42-205ENST00000498236 HDAC4P56524 1084 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 MLLT1Q03111 559 aaPredicted RBP7.97□□□□□ -1.13
CDC42-205ENST00000498236 GPR17Q13304 367 aa7.97□□□□□ -1.13
CDC42-205ENST00000498236 CUL1Q13616 776 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms