RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 ZNF510Q9Y2H8 683 aa17.29■□□□□ 0.36
VIM-208ENST00000497849 PTPN13Q12923 2485 aa17.28■□□□□ 0.36
VIM-208ENST00000497849 TGFB1I1O43294 461 aa17.28■□□□□ 0.36
VIM-208ENST00000497849 WNT1P04628 370 aa17.28■□□□□ 0.36
VIM-208ENST00000497849 BCAT1P54687 386 aa17.28■□□□□ 0.36
VIM-208ENST00000497849 C21orf59P57076 290 aa17.28■□□□□ 0.36
VIM-208ENST00000497849 RPS14P62263 151 aaKnown RBP17.28■□□□□ 0.36
VIM-208ENST00000497849 RACK1P63244 317 aaKnown RBP17.28■□□□□ 0.36
VIM-208ENST00000497849 KCNH2Q12809 1159 aa17.28■□□□□ 0.36
VIM-208ENST00000497849 CUL4AQ13619 759 aa17.28■□□□□ 0.36
VIM-208ENST00000497849 E2F5Q15329 346 aa17.28■□□□□ 0.36
VIM-208ENST00000497849 TBC1D25Q3MII6 688 aa17.28■□□□□ 0.36
VIM-208ENST00000497849 CLEC20AQ6ZU45 233 aa17.28■□□□□ 0.36
VIM-208ENST00000497849 SCD5Q86SK9 330 aa17.28■□□□□ 0.36
VIM-208ENST00000497849 CRYBG2Q8N1P7 616 aa17.28■□□□□ 0.36
VIM-208ENST00000497849 EID2Q8N6I1 236 aa17.28■□□□□ 0.36
VIM-208ENST00000497849 C12orf29Q8N999 325 aa17.28■□□□□ 0.36
VIM-208ENST00000497849 FAM181AQ8N9Y4 354 aa17.28■□□□□ 0.36
VIM-208ENST00000497849 JAKMIP2Q96AA8 810 aa17.28■□□□□ 0.36
VIM-208ENST00000497849 WBP1Q96G27 269 aa17.28■□□□□ 0.36
VIM-208ENST00000497849 SLC6A18Q96N87 628 aa17.28■□□□□ 0.36
VIM-208ENST00000497849 ACE2Q9BYF1 805 aaPredicted RBP17.28■□□□□ 0.36
VIM-208ENST00000497849 FAM49BQ9NUQ9 324 aa17.28■□□□□ 0.36
VIM-208ENST00000497849 FBXO2Q9UK22 296 aaPredicted RBP17.28■□□□□ 0.36
VIM-208ENST00000497849 AGO1Q9UL18 857 aaKnown RBP17.28■□□□□ 0.36
VIM-208ENST00000497849 A0A087X0B3 334 aa17.27■□□□□ 0.36
VIM-208ENST00000497849 TIMM44O43615 452 aa17.27■□□□□ 0.36
VIM-208ENST00000497849 ITGAVP06756 1048 aa17.27■□□□□ 0.36
VIM-208ENST00000497849 CORO1AP31146 461 aaKnown RBP17.27■□□□□ 0.36
VIM-208ENST00000497849 ACTN2P35609 894 aa17.27■□□□□ 0.36
VIM-208ENST00000497849 BMT2Q1RMZ1 405 aa17.27■□□□□ 0.36
VIM-208ENST00000497849 ZNF667Q5HYK9 610 aa17.27■□□□□ 0.36
VIM-208ENST00000497849 ZNF276Q8N554 614 aa17.27■□□□□ 0.36
VIM-208ENST00000497849 CLIC6Q96NY7 704 aa17.27■□□□□ 0.36
VIM-208ENST00000497849 SLC2A11Q9BYW1 496 aa17.27■□□□□ 0.36
VIM-208ENST00000497849 EBF2Q9HAK2 575 aa17.27■□□□□ 0.36
VIM-208ENST00000497849 SGK2Q9HBY8 427 aa17.27■□□□□ 0.36
VIM-208ENST00000497849 PRSS16Q9NQE7 514 aa17.27■□□□□ 0.36
VIM-208ENST00000497849 AGPAT3Q9NRZ7 376 aa17.27■□□□□ 0.36
VIM-208ENST00000497849 NAGPAQ9UK23 515 aa17.27■□□□□ 0.36
VIM-208ENST00000497849 A0A1W2PPC4 97 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 B8ZZF3 427 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 CLIC2O15247 247 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 HMBSP08397 361 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 FAM200BP0CF97 657 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 ABCB4P21439 1286 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 ADORA2BP29275 332 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 CASP4P49662 377 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 NDST1P52848 882 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 RHDQ02161 417 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 ZBTB16Q05516 673 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 ZNF699Q32M78 642 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 KIAA0895LQ68EN5 471 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 EPM2AIP1Q7L775 607 aaPredicted RBP17.26■□□□□ 0.35
VIM-208ENST00000497849 CACTIN-AS1Q8N1I8 211 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 CPXM2Q8N436 756 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 PLEKHO2Q8TD55 490 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 CYB5D2Q8WUJ1 264 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 PANK2Q9BZ23 570 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 RASAL2Q9UJF2 1139 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 PCDHA5Q9Y5H7 936 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 CLIC4Q9Y696 253 aa17.26■□□□□ 0.35
VIM-208ENST00000497849 PIEZO2Q9H5I5 2752 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 PHACTR2O75167 634 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 DNTTP04053 509 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 CYBBP04839 570 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 EPHA8P29322 1005 aaPredicted RBP17.25■□□□□ 0.35
VIM-208ENST00000497849 HLA-FP30511 346 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 CYP2J2P51589 502 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 KIF11P52732 1056 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 COG7P83436 770 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 KCNC4Q03721 635 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 ARID5AQ03989 594 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 LY6DQ14210 128 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 PKDCCQ504Y2 493 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 FNDC3BQ53EP0 1204 aaKnown RBP17.25■□□□□ 0.35
VIM-208ENST00000497849 STXBP4Q6ZWJ1 553 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 DENND1CQ8IV53 801 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 CCDC65Q8IXS2 484 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 XXYLT1Q8NBI6 393 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 ZNF507Q8TCN5 953 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 DDI1Q8WTU0 396 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 RFFLQ8WZ73 363 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 DCLK3Q9C098 648 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 CPNE5Q9HCH3 593 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 CLCA2Q9UQC9 943 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 SMC3Q9UQE7 1217 aa17.25■□□□□ 0.35
VIM-208ENST00000497849 SRPRBQ9Y5M8 271 aaKnown RBP17.25■□□□□ 0.35
VIM-208ENST00000497849 WNT9AO14904 365 aa17.24■□□□□ 0.35
VIM-208ENST00000497849 VNN1O95497 513 aa17.24■□□□□ 0.35
VIM-208ENST00000497849 GLDCP23378 1020 aa17.24■□□□□ 0.35
VIM-208ENST00000497849 STAT6P42226 847 aa17.24■□□□□ 0.35
VIM-208ENST00000497849 PSEN1P49768 467 aa17.24■□□□□ 0.35
VIM-208ENST00000497849 INSM1Q01101 510 aaPredicted RBP17.24■□□□□ 0.35
VIM-208ENST00000497849 EFEMP1Q12805 493 aa17.24■□□□□ 0.35
VIM-208ENST00000497849 ILKQ13418 452 aa17.24■□□□□ 0.35
VIM-208ENST00000497849 CCDC73Q6ZRK6 1079 aa17.24■□□□□ 0.35
VIM-208ENST00000497849 CCDC186Q7Z3E2 898 aa17.24■□□□□ 0.35
VIM-208ENST00000497849 BRAPQ7Z569 592 aa17.24■□□□□ 0.35
VIM-208ENST00000497849 TADA2BQ86TJ2 420 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms