RNA–Protein interactions for RNA: ENST00000497816.1

IVD-209, Transcript of isovaleryl-CoA dehydrogenase, human

TSL 1 (best)

Gene IVD, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IVD-209	ENST00000497816	SGSH	P51688	502 aa		15.21	■□□□□ 0.03
IVD-209	ENST00000497816	ZNF445	P59923	1031 aa		15.21	■□□□□ 0.03
IVD-209	ENST00000497816	PDCL	Q13371	301 aa		15.21	■□□□□ 0.03
IVD-209	ENST00000497816	KCNJ12	Q14500	433 aa		15.21	■□□□□ 0.03
IVD-209	ENST00000497816	SF3A2	Q15428	464 aa	Known RBP	15.21	■□□□□ 0.03
IVD-209	ENST00000497816	MPPE1	Q53F39	396 aa		15.21	■□□□□ 0.03
IVD-209	ENST00000497816	NUGGC	Q68CJ6	796 aa		15.21	■□□□□ 0.03
IVD-209	ENST00000497816	ANKS1B	Q7Z6G8	1248 aa		15.21	■□□□□ 0.03
IVD-209	ENST00000497816	WDTC1	Q8N5D0	677 aa		15.21	■□□□□ 0.03
IVD-209	ENST00000497816	FRMD1	Q8N878	549 aa		15.21	■□□□□ 0.03
IVD-209	ENST00000497816	IPO4	Q8TEX9	1081 aa	Known RBP	15.21	■□□□□ 0.03
IVD-209	ENST00000497816	FAM149B1	Q96BN6	582 aa		15.21	■□□□□ 0.03
IVD-209	ENST00000497816	FCRL2	Q96LA5	508 aa	Predicted RBP	15.21	■□□□□ 0.03
IVD-209	ENST00000497816	NYNRIN	Q9P2P1	1898 aa	Known RBP	15.21	■□□□□ 0.03
IVD-209	ENST00000497816	TJP2	Q9UDY2	1190 aa		15.21	■□□□□ 0.03
IVD-209	ENST00000497816	PCDHGC3	Q9UN70	934 aa		15.21	■□□□□ 0.03
IVD-209	ENST00000497816	NAALADL1	Q9UQQ1	740 aa		15.21	■□□□□ 0.03
IVD-209	ENST00000497816	GON4L	Q3T8J9	2241 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	BCLAF3	A2AJT9	711 aa	Known RBP	15.2	■□□□□ 0.02
IVD-209	ENST00000497816	WASH3P	C4AMC7	463 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	FOXN3	O00409	490 aa	Predicted RBP	15.2	■□□□□ 0.02
IVD-209	ENST00000497816	GDF9	O60383	454 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	PNMA6A	P0CW24	399 aa	Predicted RBP	15.2	■□□□□ 0.02
IVD-209	ENST00000497816	ATXN1	P54253	815 aa	Known RBP	15.2	■□□□□ 0.02
IVD-209	ENST00000497816	TBX4	P57082	545 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	KCNMA1	Q12791	1236 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	NNT	Q13423	1086 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	ENPP2	Q13822	863 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	FAM133B	Q5BKY9	247 aa	Known RBP	15.2	■□□□□ 0.02
IVD-209	ENST00000497816	TCP11X2	Q5H9J9	407 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	SYPL2	Q5VXT5	272 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	TMEM215	Q68D42	235 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	RNF43	Q68DV7	783 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	SDE2	Q6IQ49	451 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	DGLUCY	Q7Z3D6	616 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	UNC45B	Q8IWX7	931 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	NETO1	Q8TDF5	533 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	AZIN2	Q96A70	460 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	SLC39A13	Q96H72	371 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	SMOC1	Q9H4F8	434 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	CALCOCO1	Q9P1Z2	691 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	THAP10	Q9P2Z0	257 aa	Predicted RBP	15.2	■□□□□ 0.02
IVD-209	ENST00000497816	MBD1	Q9UIS9	605 aa	Predicted RBP	15.2	■□□□□ 0.02
IVD-209	ENST00000497816	TLR6	Q9Y2C9	796 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	RAD54B	Q9Y620	910 aa		15.2	■□□□□ 0.02
IVD-209	ENST00000497816	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	15.19	■□□□□ 0.02
IVD-209	ENST00000497816	ACSL4	O60488	711 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	NDUFV2	P19404	249 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	SLC6A4	P31645	630 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	CLCN1	P35523	988 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	FOXK2	Q01167	660 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	CREB5	Q02930	508 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	PTK2	Q05397	1052 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	EIF4H	Q15056	248 aa	Known RBP	15.19	■□□□□ 0.02
IVD-209	ENST00000497816	PIK3R6	Q5UE93	754 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	NADSYN1	Q6IA69	706 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	RFWD3	Q6PCD5	774 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	TAC4	Q86UU9	113 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	FAM71A	Q8IYT1	594 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	PGBD3	Q8N328	593 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	ENOX1	Q8TC92	643 aa	Known RBP	15.19	■□□□□ 0.02
IVD-209	ENST00000497816	TMA16	Q96EY4	203 aa	Known RBP	15.19	■□□□□ 0.02
IVD-209	ENST00000497816	SPACA7	Q96KW9	195 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	SERPINB11	Q96P15	392 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	CPXM1	Q96SM3	734 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	RTKN	Q9BST9	563 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	TRIM62	Q9BVG3	475 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	IRX2	Q9BZI1	471 aa	Predicted RBP	15.19	■□□□□ 0.02
IVD-209	ENST00000497816	LHX5	Q9H2C1	402 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	VPS45	Q9NRW7	570 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	RXFP3	Q9NSD7	469 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	ELOVL2	Q9NXB9	296 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	NFE2L3	Q9Y4A8	694 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	STON1	Q9Y6Q2	735 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	ADAMTS9	Q9P2N4	1935 aa		15.19	■□□□□ 0.02
IVD-209	ENST00000497816	GOLGA6L7	A0A1B0GV03	622 aa		15.18	■□□□□ 0.02
IVD-209	ENST00000497816	SLC30A4	O14863	429 aa		15.18	■□□□□ 0.02
IVD-209	ENST00000497816	NPC1	O15118	1278 aa		15.18	■□□□□ 0.02
IVD-209	ENST00000497816	IGLV3-25	P01717	112 aa		15.18	■□□□□ 0.02
IVD-209	ENST00000497816	EEF1G	P26641	437 aa	Known RBP	15.18	■□□□□ 0.02
IVD-209	ENST00000497816	HLA-F	P30511	346 aa		15.18	■□□□□ 0.02
IVD-209	ENST00000497816	IL12RB1	P42701	662 aa		15.18	■□□□□ 0.02
IVD-209	ENST00000497816	SLC11A2	P49281	568 aa		15.18	■□□□□ 0.02
IVD-209	ENST00000497816	BYSL	Q13895	437 aa	Known RBP	15.18	■□□□□ 0.02
IVD-209	ENST00000497816	CDKAL1	Q5VV42	579 aa		15.18	■□□□□ 0.02
IVD-209	ENST00000497816	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	15.18	■□□□□ 0.02
IVD-209	ENST00000497816	SLC47A2	Q86VL8	602 aa		15.18	■□□□□ 0.02
IVD-209	ENST00000497816	PASD1	Q8IV76	773 aa		15.18	■□□□□ 0.02
IVD-209	ENST00000497816	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	15.18	■□□□□ 0.02
IVD-209	ENST00000497816	ADAM32	Q8TC27	787 aa		15.18	■□□□□ 0.02
IVD-209	ENST00000497816	UCMA	Q8WVF2	138 aa		15.18	■□□□□ 0.02
IVD-209	ENST00000497816	ERLEC1	Q96DZ1	483 aa		15.18	■□□□□ 0.02
IVD-209	ENST00000497816	NAA15	Q9BXJ9	866 aa	Known RBP	15.18	■□□□□ 0.02
IVD-209	ENST00000497816	POPDC2	Q9HBU9	364 aa		15.18	■□□□□ 0.02
IVD-209	ENST00000497816	FHOD1	Q9Y613	1164 aa		15.18	■□□□□ 0.02
IVD-209	ENST00000497816	IRAK2	O43187	625 aa		15.17	■□□□□ 0.02
IVD-209	ENST00000497816	CAVIN2	O95810	425 aa		15.17	■□□□□ 0.02
IVD-209	ENST00000497816	YWHAZ	P63104	245 aa	Known RBP	15.17	■□□□□ 0.02
IVD-209	ENST00000497816	PITX1	P78337	314 aa	Predicted RBP	15.17	■□□□□ 0.02
IVD-209	ENST00000497816	ZNF234	Q14588	700 aa		15.17	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms