RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 SUFUQ9UMX1 484 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 RCE1Q9Y256 329 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 ZBTB1Q9Y2K1 713 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 SH3BP1Q9Y3L3 701 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 DISP1Q96F81 1524 aa6.48□□□□□ -1.37
BRCA1-224ENST00000497488 CCDC151A5D8V7 595 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 BTBD11A6QL63 1104 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 C1QTNF9BB2RNN3 333 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 MPHOSPH10O00566 681 aaKnown RBP6.47□□□□□ -1.37
BRCA1-224ENST00000497488 KERAO60938 352 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 HEXIM1O94992 359 aaKnown RBP6.47□□□□□ -1.37
BRCA1-224ENST00000497488 CCDC175P0C221 793 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 PCP11498 1178 aaKnown RBP6.47□□□□□ -1.37
BRCA1-224ENST00000497488 SELLP14151 372 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 PBX3P40426 434 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 PNPLA4P41247 253 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 LIMK1P53667 647 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 CDH8P55286 799 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 TMEM115Q12893 351 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-224ENST00000497488 CAMK2DQ13557 499 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 PCLAFQ15004 111 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 MGAT5BQ3V5L5 792 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 RALGPS1Q5JS13 557 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 MFSD14BQ5SR56 506 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 CAVIN1Q6NZI2 390 aaKnown RBP6.47□□□□□ -1.37
BRCA1-224ENST00000497488 MSANTD2Q6P1R3 559 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 CRELD2Q6UXH1 353 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-224ENST00000497488 ADGRG6Q86SQ4 1221 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 SPPL2CQ8IUH8 684 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 BEND7Q8N7W2 519 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-224ENST00000497488 PTGR2Q8N8N7 351 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-224ENST00000497488 SYT2Q8N9I0 419 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-224ENST00000497488 RFWD2Q8NHY2 731 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 MBD3L2Q8NHZ7 208 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-224ENST00000497488 ZDHHC12Q96GR4 267 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 PWWP2AQ96N64 755 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 ATP6V0BQ99437 205 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 MRI1Q9BV20 369 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 FUT8Q9BYC5 575 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 KATNBL1Q9H079 304 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 MMADHCQ9H3L0 296 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-224ENST00000497488 CCDC134Q9H6E4 229 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 SYNPO2LQ9H987 977 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 LRRC4CQ9HCJ2 640 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 MKL2Q9ULH7 1088 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 NAP1L2Q9ULW6 460 aaPredicted RBP6.47□□□□□ -1.37
BRCA1-224ENST00000497488 ENTPD2Q9Y5L3 495 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 TRPV2Q9Y5S1 764 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 ADCY10Q96PN6 1610 aa6.47□□□□□ -1.37
BRCA1-224ENST00000497488 UGGT2Q9NYU1 1516 aa6.46□□□□□ -1.37
BRCA1-224ENST00000497488 CTTNBP2Q8WZ74 1663 aa6.46□□□□□ -1.37
BRCA1-224ENST00000497488 FAM237BA0A1B0GVD1 139 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 A0A1W2PQM1 296 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 URADA6NGE7 173 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 GCOM1H8Y6P7 765 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-224ENST00000497488 RGS10O43665 173 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 ZBTB14O43829 449 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 EXOC3O60645 756 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 LMNAP02545 664 aaKnown RBP6.46□□□□□ -1.38
BRCA1-224ENST00000497488 TNNT1P13805 278 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 GAP43P17677 238 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 MCM3P25205 808 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 MSX2P35548 267 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-224ENST00000497488 ARL4AP40617 200 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 STAT5BP51692 787 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 EIF3BP55884 814 aaKnown RBP6.46□□□□□ -1.38
BRCA1-224ENST00000497488 RRP1P56182 461 aaKnown RBP6.46□□□□□ -1.38
BRCA1-224ENST00000497488 POLR2FP61218 127 aaKnown RBP6.46□□□□□ -1.38
BRCA1-224ENST00000497488 UFM1P61960 85 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 KRT17Q04695 432 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 FHL3Q13643 280 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 ZIK1Q3SY52 487 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-224ENST00000497488 ZNF569Q5MCW4 686 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 PHF19Q5T6S3 580 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 UTP14CQ5TAP6 766 aaKnown RBP6.46□□□□□ -1.38
BRCA1-224ENST00000497488 ZNF529Q6P280 563 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 WDR73Q6P4I2 378 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 USP51Q70EK9 711 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 UBE3BQ7Z3V4 1068 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 ZNF280BQ86YH2 543 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 STPG3Q8N7X2 389 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 TMIEQ8NEW7 156 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 BPIFB1Q8TDL5 484 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 POMGNT1Q8WZA1 660 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 GFM2Q969S9 779 aaKnown RBP6.46□□□□□ -1.38
BRCA1-224ENST00000497488 CEP95Q96GE4 821 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 MASTLQ96GX5 879 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 ZNF668Q96K58 619 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-224ENST00000497488 FER1L6-AS2Q96M78 137 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 WDR24Q96S15 920 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 ST6GALNAC4Q9H4F1 302 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.46□□□□□ -1.38
BRCA1-224ENST00000497488 MRPS18AQ9NVS2 196 aaKnown RBP6.46□□□□□ -1.38
BRCA1-224ENST00000497488 SLAMF8Q9P0V8 285 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 PIM2Q9P1W9 311 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 SH3BGRL2Q9UJC5 107 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 USP22Q9UPT9 525 aa6.46□□□□□ -1.38
BRCA1-224ENST00000497488 DRG1Q9Y295 367 aaKnown RBP6.46□□□□□ -1.38
BRCA1-224ENST00000497488 EEA1Q15075 1411 aa6.45□□□□□ -1.38
BRCA1-224ENST00000497488 hCG_1809904A0A1W2PP81 198 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms